GeoTIFF: Minor change.

src/Model/Reservoir/Reservoir.py

@@ -310,7 +310,7 @@ class Reservoir(SQLSubModel):
                 new_reservoir.set_as_deleted()
 
             new_reservoir._node = None
-            if node_id != -1:
+            if node_id != -1 and node_id is not None:
                 new_reservoir._node = next(
                     filter(
                         lambda n: n.id == node_id, data["nodes"]

src/View/GeoTIFF/Edit/Window.py

@@ -35,6 +35,7 @@ from View.GeoTIFF.UndoCommand import (
     SetCommand
 )
 
+from View.Tools.Plot.PamhyrToolbar import PamhyrPlotToolbar
 from View.Tools.Plot.PamhyrCanvas import MplCanvas
 from View.PlotXY import PlotXY
 
@@ -87,6 +88,11 @@ class EditGeoTIFFWindow(PamhyrWindow):
         self.canvas.setObjectName("canvas")
         self.plot_layout = self.find(QVBoxLayout,
                                      "verticalLayout_geotiff")
+        self._toolbar = PamhyrPlotToolbar(
+            self.canvas, self,
+            items=["home", "zoom", "save", "iso", "back/forward", "move"]
+        )
+        self.plot_layout.addWidget(self._toolbar)
         self.plot_layout.addWidget(self.canvas)
 
         self.plot = PlotXY(
@@ -124,16 +130,16 @@ class EditGeoTIFFWindow(PamhyrWindow):
     def _set_values_from_bounds(self, bounds):
         self._values = {
             "bottom": bounds[0],
-            "top": bounds[2],
-            "left": bounds[1],
+            "top": bounds[1],
+            "left": bounds[2],
             "right": bounds[3],
         }
 
     def _set_default_values_from_bounds(self, bounds):
         self._values_default = {
             "bottom": bounds[0],
-            "top": bounds[2],
-            "left": bounds[1],
+            "top": bounds[1],
+            "left": bounds[2],
             "right": bounds[3],
         }
 
@@ -143,8 +149,7 @@ class EditGeoTIFFWindow(PamhyrWindow):
 
     def _reset_spinbox(self, key):
         self.set_double_spin_box(
-            f"doubleSpinBox_{key}",
-            self._values_default[key]
+            f"doubleSpinBox_{key}", self._values_default[key]
         )
 
     def setup_connection(self):
@@ -155,14 +160,31 @@ class EditGeoTIFFWindow(PamhyrWindow):
         self.find(QPushButton, "pushButton_import")\
             .clicked.connect(self._import)
 
-        for key in self._values:
-            self.find(QPushButton, f"pushButton_{key}")\
-                .clicked.connect(lambda: self._reset_spinbox(key))
+        self.find(QPushButton, "pushButton_bottom")\
+            .clicked.connect(lambda: self._reset_spinbox("bottom"))
+        self.find(QPushButton, "pushButton_top")\
+            .clicked.connect(lambda: self._reset_spinbox("top"))
+        self.find(QPushButton, f"pushButton_left")\
+            .clicked.connect(lambda: self._reset_spinbox("left"))
+        self.find(QPushButton, f"pushButton_right")\
+            .clicked.connect(lambda: self._reset_spinbox("right"))
 
-            self.find(QDoubleSpinBox, f"doubleSpinBox_{key}")\
-                .valueChanged.connect(
-                    lambda: self.update_values_from_spinbox(key)
-                )
+        self.find(QDoubleSpinBox, f"doubleSpinBox_bottom")\
+            .valueChanged.connect(
+                lambda: self.update_values_from_spinbox("bottom")
+            )
+        self.find(QDoubleSpinBox, f"doubleSpinBox_top")\
+            .valueChanged.connect(
+                lambda: self.update_values_from_spinbox("top")
+            )
+        self.find(QDoubleSpinBox, f"doubleSpinBox_left")\
+            .valueChanged.connect(
+                lambda: self.update_values_from_spinbox("left")
+            )
+        self.find(QDoubleSpinBox, f"doubleSpinBox_right")\
+            .valueChanged.connect(
+                lambda: self.update_values_from_spinbox("right")
+            )
 
     def update_values_from_spinbox(self, key):
         self._values[key] = self.get_double_spin_box(f"doubleSpinBox_{key}")
@@ -180,13 +202,20 @@ class EditGeoTIFFWindow(PamhyrWindow):
 
             with rasterio.open(self._file_name) as data:
                 img = data.read()
-                b = data.bounds[:]
+                b = data.bounds[:]  # left, bottom, right, top
 
-                self._set_values_from_bounds(b)
+                if b[2] > b[0] and b[1] < b[3]:
+                    coord = [b[0], b[2], b[1], b[3]]
+                else:
+                    xlim = self.canvas.axes.get_xlim()
+                    ylim = self.canvas.axes.get_ylim()
+                    coord = xlim + ylim
+
+                self._set_values_from_bounds(coord)
+                self._set_default_values_from_bounds(coord)
         else:
             with memfile.open() as gt:
                 img = gt.read()
-                b = gt.bounds[:]
 
         if self._plot_img is not None:
             self._plot_img.remove()
@@ -197,6 +226,7 @@ class EditGeoTIFFWindow(PamhyrWindow):
         )
 
         self.plot.idle()
+        self._reset_spinboxes()
 
     def _import(self):
         options = QFileDialog.Options()

src/View/GeoTIFF/Window.py

@@ -86,17 +86,14 @@ class GeoTIFFListWindow(PamhyrWindow):
         self.plot = PlotXY(
             canvas=self.canvas,
             data=self._study.river.enable_edges(),
+            geotiff=self._study.river.geotiff,
             trad=self._trad,
             toolbar=None,
             parent=self
         )
+
         self.plot.update()
 
-        self._plot_img = {}
-
-        for geotiff in self._study.river.geotiff.lst:
-            self.draw_geotiff(geotiff)
-
     def setup_connections(self):
         if self._study.is_editable():
             self.find(QAction, "action_add").triggered.connect(self.add)
@@ -104,39 +101,9 @@ class GeoTIFFListWindow(PamhyrWindow):
 
         self.find(QAction, "action_edit").triggered.connect(self.edit)
 
-    def draw_geotiff(self, geotiff):
-        if not _rasterio_loaded:
-            return
-
-        memfile = geotiff.memfile
-        if memfile is None:
-            return
-
-        with memfile.open() as gt:
-            img = gt.read()
-            coords = geotiff.coordinates
-
-            if geotiff in self._plot_img:
-                self._plot_img[geotiff].remove()
-
-            self._plot_img[geotiff] = self.canvas.axes.imshow(
-                img.transpose((1, 2, 0)),
-                extent=list(coords.values())
-            )
-
-            self.plot.idle()
-
     def update(self):
         self._list.update()
 
-        for geotiff in self._plot_img:
-            self._plot_img[geotiff].remove()
-
-        self._plot_img = {}
-
-        for geotiff in self._study.river.geotiff.files:
-            self.draw_geotiff(geotiff)
-
     def selected_rows(self):
         lst = self.find(QListView, f"listView")
         return list(map(lambda i: i.row(), lst.selectedIndexes()))

src/View/MainWindowTabInfo.py

@@ -27,6 +27,20 @@ from View.Tools.PamhyrWidget import PamhyrWidget
 
 from PyQt5.QtWidgets import QVBoxLayout
 
+try:
+    import rasterio
+    import rasterio.control
+    import rasterio.crs
+    import rasterio.sample
+    import rasterio.vrt
+    import rasterio._features
+
+    from rasterio.io import MemoryFile
+    _rasterio_loaded = True
+except Exception as e:
+    print(f"Module 'rasterio' is not available: {e}")
+    _rasterio_loaded = False
+
 logger = logging.getLogger()
 
 
@@ -104,10 +118,12 @@ class WidgetInfo(PamhyrWidget):
         self.plot = PlotXY(
             canvas=self.canvas,
             data=self._study.river.enable_edges(),
+            geotiff=self._study.river.geotiff,
             trad=self.parent._trad,
             toolbar=self._toolbar_xy,
             parent=self
         )
+
         self.plot.update()
 
     def set_network_values(self):

src/View/PlotXY.py

@@ -27,12 +27,26 @@ from PyQt5.QtCore import (
 )
 from PyQt5.QtWidgets import QApplication, QTableView
 
+try:
+    import rasterio
+    import rasterio.control
+    import rasterio.crs
+    import rasterio.sample
+    import rasterio.vrt
+    import rasterio._features
+
+    from rasterio.io import MemoryFile
+    _rasterio_loaded = True
+except Exception as e:
+    print(f"Module 'rasterio' is not available: {e}")
+    _rasterio_loaded = False
+
 _translate = QCoreApplication.translate
 
 
 class PlotXY(PamhyrPlot):
-    def __init__(self, canvas=None, trad=None, data=None, toolbar=None,
-                 table=None, parent=None):
+    def __init__(self, canvas=None, trad=None, data=None, geotiff=None,
+                 toolbar=None, table=None, parent=None):
         super(PlotXY, self).__init__(
             canvas=canvas,
             trad=trad,
@@ -43,10 +57,14 @@ class PlotXY(PamhyrPlot):
         )
 
         self._data = data
+        self._geotiff = geotiff
+
         self.label_x = self._trad["x"]
         self.label_y = self._trad["y"]
         self.parent = parent
 
+        self._plot_img = {}
+
         self._isometric_axis = True
 
         self._auto_relim_update = True
@@ -69,7 +87,12 @@ class PlotXY(PamhyrPlot):
             if data.reach.number_profiles != 0:
                 self.draw_xy(data.reach)
                 self.draw_lr(data.reach)
-                self.idle()
+
+        if self._geotiff is not None:
+            self.draw_geotiff(self._geotiff.files)
+
+        self.idle()
+
         return
 
     def draw_xy(self, reach):
@@ -78,9 +101,9 @@ class PlotXY(PamhyrPlot):
             line_xy.append(np.column_stack(xy))
 
         line_xy_collection = collections.LineCollection(
-                line_xy,
-                colors=self.color_plot_river_bottom
-            )
+            line_xy,
+            colors=self.color_plot_river_bottom
+        )
         self.canvas.axes.add_collection(line_xy_collection)
 
     def draw_lr(self, reach):
@@ -113,6 +136,34 @@ class PlotXY(PamhyrPlot):
         )
         self.line_lr.append(line)
 
+    def draw_geotiff(self, lst):
+        if not _rasterio_loaded:
+            return
+
+        for img in self._plot_img:
+            self._plot_img[img].remove()
+
+        self._plot_img = {}
+
+        for geotiff in lst:
+            memfile = geotiff.memfile
+            if memfile is None:
+                return
+
+            with memfile.open() as gt:
+                img = gt.read()
+                coords = geotiff.coordinates
+
+                self._plot_img[geotiff] = self.canvas.axes.imshow(
+                    img.transpose((1, 2, 0)),
+                    extent=list(coords.values())
+                )
+
+            if not geotiff.is_enabled():
+                self._plot_img[geotiff].set(alpha=0.5)
+
+        self.idle()
+
     @timer
     def update(self):
         self.draw()

src/View/Results/PlotXY.py

@@ -31,6 +31,20 @@ from PyQt5.QtCore import (
 )
 from PyQt5.QtWidgets import QApplication, QTableView
 
+try:
+    import rasterio
+    import rasterio.control
+    import rasterio.crs
+    import rasterio.sample
+    import rasterio.vrt
+    import rasterio._features
+
+    from rasterio.io import MemoryFile
+    _rasterio_loaded = True
+except Exception as e:
+    print(f"Module 'rasterio' is not available: {e}")
+    _rasterio_loaded = False
+
 _translate = QCoreApplication.translate
 
 logger = logging.getLogger()
@@ -52,6 +66,8 @@ class PlotXY(PamhyrPlot):
         self.line_gl = []
         self.overflow = []
 
+        self._plot_img = {}
+
         self._timestamps = parent._timestamps
         self._current_timestamp = max(self._timestamps)
         self._current_reach_id = reach_id
@@ -153,6 +169,7 @@ class PlotXY(PamhyrPlot):
         reach = results.river.reach(self._current_reach_id)
         reaches = results.river.reachs
 
+        self.draw_geotiff()
         self.draw_profiles(reach, reaches)
         self.draw_water_elevation(reach)
         self.draw_water_elevation_max(reach)
@@ -166,6 +183,7 @@ class PlotXY(PamhyrPlot):
         if reach.geometry.number_profiles == 0:
             self._init = False
             return
+
         self.line_xy = []
         # TODO uncomment to draw all the reaches
         # self.draw_other_profiles(reaches)
@@ -306,6 +324,36 @@ class PlotXY(PamhyrPlot):
             alpha=0.7
         )
 
+    def draw_geotiff(self):
+        if not _rasterio_loaded:
+            return
+
+        lst = self._data[0]._study.river._geotiff.lst
+
+        for img in self._plot_img:
+            self._plot_img[img].remove()
+
+        self._plot_img = {}
+
+        for geotiff in lst:
+            memfile = geotiff.memfile
+            if memfile is None:
+                return
+
+            with memfile.open() as gt:
+                img = gt.read()
+                coords = geotiff.coordinates
+
+                self._plot_img[geotiff] = self.canvas.axes.imshow(
+                    img.transpose((1, 2, 0)),
+                    extent=list(coords.values())
+                )
+
+            if not geotiff.is_enabled():
+                self._plot_img[geotiff].set(alpha=0.5)
+
+        self.idle()
+
     def set_reach(self, reach_id):
         self._current_reach_id = reach_id
         self._current_profile_id = 0

src/View/ui/GeoTIFF.ui

@@ -0,0 +1,264 @@
+<?xml version="1.0" encoding="UTF-8"?>
+<ui version="4.0">
+ <class>MainWindow</class>
+ <widget class="QMainWindow" name="MainWindow">
+  <property name="geometry">
+   <rect>
+    <x>0</x>
+    <y>0</y>
+    <width>896</width>
+    <height>504</height>
+   </rect>
+  </property>
+  <property name="windowTitle">
+   <string>MainWindow</string>
+  </property>
+  <property name="locale">
+   <locale language="English" country="Europe"/>
+  </property>
+  <widget class="QWidget" name="centralwidget">
+   <layout class="QGridLayout" name="gridLayout_3">
+    <item row="2" column="1">
+     <layout class="QHBoxLayout" name="horizontalLayout">
+      <item>
+       <spacer name="horizontalSpacer">
+        <property name="orientation">
+         <enum>Qt::Horizontal</enum>
+        </property>
+        <property name="sizeHint" stdset="0">
+         <size>
+          <width>40</width>
+          <height>20</height>
+         </size>
+        </property>
+       </spacer>
+      </item>
+      <item>
+       <widget class="QPushButton" name="pushButton_cancel">
+        <property name="text">
+         <string>Cancel</string>
+        </property>
+       </widget>
+      </item>
+      <item>
+       <widget class="QPushButton" name="pushButton_ok">
+        <property name="text">
+         <string>Ok</string>
+        </property>
+       </widget>
+      </item>
+     </layout>
+    </item>
+    <item row="0" column="0" colspan="2">
+     <widget class="QGroupBox" name="groupBox">
+      <property name="title">
+       <string>Informations</string>
+      </property>
+      <layout class="QGridLayout" name="gridLayout">
+       <item row="0" column="0">
+        <widget class="QLabel" name="label">
+         <property name="text">
+          <string>Name</string>
+         </property>
+        </widget>
+       </item>
+       <item row="2" column="0">
+        <widget class="QCheckBox" name="checkBox">
+         <property name="text">
+          <string>Enabled</string>
+         </property>
+         <property name="checked">
+          <bool>true</bool>
+         </property>
+        </widget>
+       </item>
+       <item row="1" column="0">
+        <widget class="QLabel" name="label_2">
+         <property name="text">
+          <string>Description</string>
+         </property>
+        </widget>
+       </item>
+       <item row="1" column="1">
+        <widget class="QLineEdit" name="lineEdit_description">
+         <property name="toolTip">
+          <string>The relative file path on executable directory</string>
+         </property>
+        </widget>
+       </item>
+       <item row="0" column="1">
+        <widget class="QLineEdit" name="lineEdit_name"/>
+       </item>
+      </layout>
+     </widget>
+    </item>
+    <item row="1" column="0" colspan="2">
+     <widget class="QGroupBox" name="groupBox_2">
+      <property name="title">
+       <string>GeoTIFF file</string>
+      </property>
+      <layout class="QVBoxLayout" name="verticalLayout_2">
+       <item>
+        <widget class="QPushButton" name="pushButton_import">
+         <property name="text">
+          <string>Import GeoTIFF file</string>
+         </property>
+        </widget>
+       </item>
+       <item>
+        <widget class="QSplitter" name="splitter">
+         <property name="orientation">
+          <enum>Qt::Horizontal</enum>
+         </property>
+         <widget class="QWidget" name="">
+          <layout class="QVBoxLayout" name="verticalLayout_geotiff"/>
+         </widget>
+         <widget class="QWidget" name="">
+          <layout class="QVBoxLayout" name="verticalLayout">
+           <item>
+            <layout class="QGridLayout" name="gridLayout_2">
+             <item row="2" column="2">
+              <widget class="QPushButton" name="pushButton_left">
+               <property name="text">
+                <string>Reset</string>
+               </property>
+              </widget>
+             </item>
+             <item row="3" column="0">
+              <widget class="QLabel" name="label_right">
+               <property name="enabled">
+                <bool>true</bool>
+               </property>
+               <property name="text">
+                <string>Right coordinate</string>
+               </property>
+              </widget>
+             </item>
+             <item row="3" column="2">
+              <widget class="QPushButton" name="pushButton_right">
+               <property name="text">
+                <string>Reset</string>
+               </property>
+              </widget>
+             </item>
+             <item row="2" column="1">
+              <widget class="QDoubleSpinBox" name="doubleSpinBox_left">
+               <property name="decimals">
+                <number>4</number>
+               </property>
+               <property name="minimum">
+                <double>-99999999.000000000000000</double>
+               </property>
+               <property name="maximum">
+                <double>99999999.000000000000000</double>
+               </property>
+              </widget>
+             </item>
+             <item row="0" column="2">
+              <widget class="QPushButton" name="pushButton_bottom">
+               <property name="text">
+                <string>Reset</string>
+               </property>
+              </widget>
+             </item>
+             <item row="1" column="2">
+              <widget class="QPushButton" name="pushButton_top">
+               <property name="text">
+                <string>Reset</string>
+               </property>
+              </widget>
+             </item>
+             <item row="3" column="1">
+              <widget class="QDoubleSpinBox" name="doubleSpinBox_right">
+               <property name="decimals">
+                <number>4</number>
+               </property>
+               <property name="minimum">
+                <double>-99999999.000000000000000</double>
+               </property>
+               <property name="maximum">
+                <double>99999999.000000000000000</double>
+               </property>
+               <property name="value">
+                <double>1.000000000000000</double>
+               </property>
+              </widget>
+             </item>
+             <item row="1" column="1">
+              <widget class="QDoubleSpinBox" name="doubleSpinBox_top">
+               <property name="decimals">
+                <number>4</number>
+               </property>
+               <property name="minimum">
+                <double>-99999999.000000000000000</double>
+               </property>
+               <property name="maximum">
+                <double>99999999.000000000000000</double>
+               </property>
+               <property name="value">
+                <double>1.000000000000000</double>
+               </property>
+              </widget>
+             </item>
+             <item row="1" column="0">
+              <widget class="QLabel" name="label_top">
+               <property name="text">
+                <string>Top coordinate</string>
+               </property>
+              </widget>
+             </item>
+             <item row="0" column="1">
+              <widget class="QDoubleSpinBox" name="doubleSpinBox_bottom">
+               <property name="decimals">
+                <number>4</number>
+               </property>
+               <property name="minimum">
+                <double>-99999999.000000000000000</double>
+               </property>
+               <property name="maximum">
+                <double>99999999.000000000000000</double>
+               </property>
+              </widget>
+             </item>
+             <item row="2" column="0">
+              <widget class="QLabel" name="label_left">
+               <property name="text">
+                <string>Left coordinate</string>
+               </property>
+              </widget>
+             </item>
+             <item row="0" column="0">
+              <widget class="QLabel" name="label_bottom">
+               <property name="text">
+                <string>Bottom coordinate</string>
+               </property>
+              </widget>
+             </item>
+            </layout>
+           </item>
+           <item>
+            <spacer name="verticalSpacer">
+             <property name="orientation">
+              <enum>Qt::Vertical</enum>
+             </property>
+             <property name="sizeHint" stdset="0">
+              <size>
+               <width>20</width>
+               <height>40</height>
+              </size>
+             </property>
+            </spacer>
+           </item>
+          </layout>
+         </widget>
+        </widget>
+       </item>
+      </layout>
+     </widget>
+    </item>
+   </layout>
+  </widget>
+ </widget>
+ <resources/>
+ <connections/>
+</ui>

src/View/ui/GeoTIFFList.ui

@@ -0,0 +1,84 @@
+<?xml version="1.0" encoding="UTF-8"?>
+<ui version="4.0">
+ <class>MainWindow</class>
+ <widget class="QMainWindow" name="MainWindow">
+  <property name="geometry">
+   <rect>
+    <x>0</x>
+    <y>0</y>
+    <width>896</width>
+    <height>504</height>
+   </rect>
+  </property>
+  <property name="windowTitle">
+   <string>MainWindow</string>
+  </property>
+  <widget class="QWidget" name="centralwidget">
+   <layout class="QVBoxLayout" name="verticalLayout_2">
+    <item>
+     <widget class="QSplitter" name="splitter">
+      <property name="orientation">
+       <enum>Qt::Horizontal</enum>
+      </property>
+      <widget class="QListView" name="listView"/>
+      <widget class="QWidget" name="verticalLayoutWidget">
+       <layout class="QVBoxLayout" name="verticalLayout"/>
+      </widget>
+     </widget>
+    </item>
+   </layout>
+  </widget>
+  <widget class="QToolBar" name="toolBar">
+   <property name="windowTitle">
+    <string>toolBar</string>
+   </property>
+   <attribute name="toolBarArea">
+    <enum>TopToolBarArea</enum>
+   </attribute>
+   <attribute name="toolBarBreak">
+    <bool>false</bool>
+   </attribute>
+   <addaction name="action_add"/>
+   <addaction name="action_delete"/>
+   <addaction name="action_edit"/>
+  </widget>
+  <action name="action_add">
+   <property name="icon">
+    <iconset>
+     <normaloff>ressources/add.png</normaloff>ressources/add.png</iconset>
+   </property>
+   <property name="text">
+    <string>Add</string>
+   </property>
+   <property name="toolTip">
+    <string>Add a new file</string>
+   </property>
+  </action>
+  <action name="action_delete">
+   <property name="icon">
+    <iconset>
+     <normaloff>ressources/del.png</normaloff>ressources/del.png</iconset>
+   </property>
+   <property name="text">
+    <string>Delete</string>
+   </property>
+   <property name="toolTip">
+    <string>Delete selected file(s)</string>
+   </property>
+  </action>
+  <action name="action_edit">
+   <property name="icon">
+    <iconset>
+     <normaloff>ressources/edit.png</normaloff>ressources/edit.png</iconset>
+   </property>
+   <property name="text">
+    <string>Edit</string>
+   </property>
+   <property name="toolTip">
+    <string>Edit file</string>
+   </property>
+  </action>
+ </widget>
+ <resources/>
+ <connections/>
+</ui>