Pamhyr2/src/Model/Results/River/River.py

474 lines
13 KiB
Python

# River.py -- Pamhyr
# Copyright (C) 2023-2026 INRAE
#
# This program is free software: you can redistribute it and/or modify
# it under the terms of the GNU General Public License as published by
# the Free Software Foundation, either version 3 of the License, or
# (at your option) any later version.
#
# This program is distributed in the hope that it will be useful,
# but WITHOUT ANY WARRANTY; without even the implied warranty of
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
# GNU General Public License for more details.
#
# You should have received a copy of the GNU General Public License
# along with this program. If not, see <https://www.gnu.org/licenses/>.
import types
import struct
import logging
import itertools
import numpy as np
from tools import flatten, timer
from functools import reduce
from datetime import datetime
from Model.Scenario import Scenario
from Model.Tools.PamhyrDB import SQLSubModel
logger = logging.getLogger()
class Profile(SQLSubModel):
def __init__(self, profile, study, parent):
super(Profile, self).__init__(
id=-1, status=study.status,
owner_scenario=study.status.scenario.id
)
self._parent = parent
self._study = study
self._profile = profile # Source profile in the study
self._data = {} # Dict of dict {<ts>: {<key>: <value>, ...}, ...}
self._global_index = -1
def __len__(self):
return len(self._data)
@property
def name(self):
return self._profile.name
@property
def rk(self):
return self._profile.rk
@property
def geometry(self):
return self._profile
@property
def global_index(self):
return self._global_index
@global_index.setter
def global_index(self, id):
self._global_index = id
@timer
def set(self, timestamp, key, data):
if timestamp not in self._data:
self._data[timestamp] = {}
self._data[timestamp][key] = data
@timer
def get_ts(self, timestamp):
return self._data[timestamp]
@timer
def get_key(self, key):
res = list(
map(lambda ts: self._data[ts][key],
sorted(self._data.keys()))
)
return res
@timer
def get_ts_key(self, timestamp, key):
if timestamp in self._data:
if key in self._data[timestamp]:
v = self._data[timestamp][key]
# If is a generator, compute value(s)
if isinstance(v, types.GeneratorType):
v = next(v)
self._data[timestamp][key] = v
return v
return None
def has_sediment_layers(self):
return any(map(lambda ts: "sl" in self._data[ts], self._data))
def has_bedload(self):
return any(map(lambda ts: "sl" in self._data[ts], self._data))
@classmethod
def _db_create(cls, execute, ext=""):
execute(f"""
CREATE TABLE results_data{ext}(
{cls.create_db_add_pamhyr_id()},
result INTEGER NOT NULL,
key TEXT NOT NULL,
reach INTEGER NOT NULL,
section INTEGER NOT NULL,
len_data INTEGER NOT NULL,
data BLOB NOT NULL,
{Scenario.create_db_add_scenario()},
{Scenario.create_db_add_scenario_fk()},
FOREIGN KEY(result) REFERENCES results(pamhyr_id),
FOREIGN KEY(reach) REFERENCES river_reach(pamhyr_id),
FOREIGN KEY(section)
REFERENCES geometry_profileXYZ(pamhyr_id),
PRIMARY KEY(pamhyr_id, result, key, scenario)
)
""")
return True
@classmethod
def _db_update(cls, execute, version, data=None):
major, minor, release = version.strip().split(".")
return cls._update_submodel(execute, version, data)
@classmethod
def _db_load(cls, execute, data=None):
status = data['status']
parent = data['parent']
study = data['study']
reach = data['reach']
profile = data['profile']
scenario = data["scenario"]
loaded = data['loaded_pid']
timestamps = data['timestamps']
new = cls(profile, study, parent)
values = execute(
"SELECT pamhyr_id, result, key, " +
"len_data, data, scenario " +
"FROM results_data " +
f"WHERE scenario = {scenario.id} " +
f"AND reach = {reach.pamhyr_id} " +
f"AND section = {profile.pamhyr_id}"
)
for v in values:
it = iter(v)
pid = next(it)
result = next(it)
key = next(it)
len_data = next(it)
data = next(it)
owner_scenario = next(it)
if key in ["Z", "Q", "V"]:
sf = ">" + ''.join(itertools.repeat("f", len_data))
len_values = len(values)
values = struct.unpack(sf, data)
elif key in ["sl"]:
sf = ">" + ''.join(itertools.repeat("f", len_data))
values = struct.unpack(sf, data)
values = cls._db_load_data_sl_format(
values, len_data, timestamps
)
for timestamp, value in zip(timestamps, values):
new.set(timestamp, key, value)
if key == "Z":
new.update_water_limits(timestamp, value)
return new
@classmethod
def _db_load_data_sl_format(cls, values, len_data, timestamps):
tuple_size = 3
# HACK: Transforme list of value to list of n-tuple
# sediment results: (h, d50, sigma)
tmp_values = [[]]
for value in values:
t = tmp_values[-1]
if len(t) < tuple_size:
t.append(value)
else:
tmp_values.append([value])
tmp_values = list(map(tuple, tmp_values))
# HACK: Transforme list of n-tuple to list of n-list
# of n-tuple, where n is the number of layer.
nb_layer = len_data / len(timestamps) / tuple_size
values = [[]]
for value in tmp_values:
t = values[-1]
if len(t) < nb_layer:
t.append(value)
else:
values.append([value])
return list(map(lambda x: [x], values))
def update_water_limits(self, timestamp, z):
limits = self.geometry.get_water_limits(z)
self.set(
timestamp, "water_limits", limits
)
def get_keys(self):
return reduce(
lambda acc, ts: acc.union(self._data[ts].keys()),
self._data.keys(), set()
)
def _db_save(self, execute, data=None):
pid = self._pamhyr_id
result = data["result"]
keys = self.get_keys()
logger.debug(f"{keys}...")
for key in keys:
values = self.get_key(key)
if key in ["Z", "Q", "V"]:
values = list(map(float, values))
sf = ">" + ''.join(itertools.repeat("f", len(values)))
len_values = len(values)
elif key == "sl":
# HACK: Some dirty code to transforme list of list of
# tuple to list of values and ensure the values is
# float type...
values = flatten(
flatten(
map(lambda v: list(
map(lambda t: list(
map(float, t)), v[0])),
values)))
len_values = len(values)
sf = ">" + ''.join(itertools.repeat("f", len_values))
else:
continue
data_bytes = struct.pack(sf, *values)
execute(
"INSERT INTO " +
"results_data (pamhyr_id, result, " +
"reach, section, " +
"key, len_data, data, " +
"scenario) VALUES (?, ?, ?, ?, ?, ?, ?, ?)",
pid, result,
data["reach"].pamhyr_id,
self._profile.pamhyr_id,
key, len_values, data_bytes,
self._owner_scenario
)
return True
class Reach(SQLSubModel):
_sub_classes = [Profile]
def __init__(self, reach, study, parent, with_init=True):
super(Reach, self).__init__(
id=-1, status=study.status,
owner_scenario=study.status.scenario.id
)
self._parent = parent
self._study = study
self._reach = reach # Source reach in the study
self._profiles = []
if with_init:
self._profiles = list(
map(
lambda p: Profile(p, self._study, self._parent),
reach.profiles
)
)
self._profile_mask = list(
map(
lambda p: p.name[0:8] != 'interpol', self._profiles
)
)
self._global_index = (-1, -1)
self._buffers = {}
def __len__(self):
return len(self._profiles)
@property
def name(self):
return self._reach.name
@property
def geometry(self):
return self._reach
@property
def profiles(self):
return self._profiles.copy()
@property
def profile_mask(self):
return self._profile_mask
@property
def buffers(self):
return self._buffers
def profile(self, id):
return self._profiles[id]
def set_global_index(self, indexs):
self._global_index = (indexs[0], indexs[-1])
for profile, ind in zip(self._profiles, indexs):
profile.global_index = ind
@property
def global_index(self):
return self._global_index
@timer
def set(self, profile_id, timestamp, key, data):
self._profiles[profile_id].set(timestamp, key, data)
def has_sediment(self):
return any(map(lambda profile: profile.has_sediment_layers(),
self._profiles))
def has_bedload(self):
return any(map(lambda profile: profile.has_bedload(), self._profiles))
def bufferize(self, timestamps, key):
self._buffers[key] = np.zeros((len(timestamps), len(self)))
for i, p in enumerate(self._profiles):
self._buffers[key][:, i] = p.get_key(key)
def update_water_limits(self, timestamp, z_data):
for profile, z in zip(self._profiles, z_data):
profile.update_water_limits(timestamp, z)
@classmethod
def _db_create(cls, execute, ext=""):
return cls._create_submodel(execute)
@classmethod
def _db_update(cls, execute, version, data=None):
return cls._update_submodel(execute, version, data)
@classmethod
def _db_load(cls, execute, data=None):
reach = data["reach"]
new_reach = cls(
data["reach"], data["study"], data["parent"],
with_init=False
)
for i, profile in enumerate(reach.profiles):
data["profile"] = profile
new_reach._profiles += [Profile._db_load(execute, data)]
return new_reach
def _db_save(self, execute, data=None):
logger.debug("Save reach...")
for profile in self._profiles:
data["profile"] = profile.geometry.pamhyr_id
profile._db_save(execute, data)
class River(SQLSubModel):
_sub_classes = [Reach]
def __init__(self, study, parent):
super(River, self).__init__(
id=-1, status=study.status,
owner_scenario=study.status.scenario.id
)
self._study = study
self._parent = parent
# Dict with timestamps as key
self._reachs = []
def __len__(self):
return len(self._reachs)
@property
def reachs(self):
return self._reachs.copy()
def reach(self, id):
return self._reachs[id]
def has_reach(self, id):
return 0 <= id < len(self._reachs)
def add(self, reach_id):
reachs = self._study.river.enable_edges()
new = Reach(reachs[reach_id].reach, self._study, self._parent)
self._reachs.append(new)
return new
def get_reach_by_geometry(self, geometry_reach):
return next(
filter(
lambda r: r.geometry is geometry_reach,
self._reachs
)
)
def update_water_limits(self, timestamp, data):
for reach in self._reachs:
ind = reach.global_index
reach.update_water_limits(
timestamp,
data[ind[0]:ind[1]]
)
@classmethod
def _db_create(cls, execute, ext=""):
return cls._create_submodel(execute)
@classmethod
def _db_update(cls, execute, version, data=None):
return cls._update_submodel(execute, version, data)
@classmethod
def _db_load(cls, execute, data=None):
study = data["study"]
parent = data["parent"]
new_river = cls(study, parent)
for reach in study.river.reachs():
data["reach"] = reach.reach
new_river._reachs.append(
Reach._db_load(execute, data)
)
return new_river
def _db_save(self, execute, data=None):
logger.debug("Save river...")
for reach in self._reachs:
data["reach"] = reach.geometry
reach._db_save(execute, data)