The sediment calibration tab includes plot of acoustic recordings and profile of the concentration of fine sediments. The user can choose the data, frequencies and select the samples for the calibration.
brahim
parent
f8e7951139
commit
57b5490f5f
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@ -710,7 +710,7 @@ class SampleDataTab(QWidget):
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self.item_checkbox_fine.setCheckState(Qt.Unchecked)
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self.tableWidget_fine.setItem(i, 1, self.item_checkbox_fine)
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self.item_checkbox_fine.setText("F" + str(i + 1))
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stg.sample_fine.append("F" + str(i + 1))
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stg.sample_fine.append(("F" + str(i + 1), i))
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# print(f"S{i+1} ", self.tableWidget_sample.item(i, 1).checkState())
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# --- Fill table with data ---
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@ -927,7 +927,7 @@ class SampleDataTab(QWidget):
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self.item_checkbox_sand.setCheckState(Qt.Unchecked)
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self.tableWidget_sand.setItem(i, 1, self.item_checkbox_sand)
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self.item_checkbox_sand.setText("S" + str(i + 1))
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stg.sample_sand.append("S" + str(i + 1))
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stg.sample_sand.append(("S" + str(i + 1), i))
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# print(f"S{i+1} ", self.tableWidget_sample.item(i, 1).checkState())
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# --- Fill table with data ---
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@ -0,0 +1,557 @@
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import sys
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import matplotlib.pyplot as plt
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from PyQt5.QtWidgets import (QWidget, QMainWindow, QApplication, QVBoxLayout, QHBoxLayout, QGroupBox, QComboBox,
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QGridLayout, QLabel, QPushButton, QSpinBox, QDoubleSpinBox, QAbstractSpinBox, QSpacerItem,
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QSizePolicy, QSlider, QLineEdit, QDial)
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from PyQt5.QtCore import QCoreApplication, Qt
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from PyQt5.QtGui import QStandardItemModel, QIcon, QPixmap
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import settings as stg
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import numpy as np
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from matplotlib.backends.backend_qt5agg import FigureCanvasQTAgg as FigureCanvas
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from matplotlib.backends.backend_qt5agg import NavigationToolbar2QT as NavigationToolBar
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from matplotlib.colors import LogNorm
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from View.checkable_combobox import CheckableComboBox
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from Model.acoustic_inversion_method_high_concentration import AcousticInversionMethodHighConcentration
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class SedimentCalibrationTab(QWidget):
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''' This class generates the Sediment Calibration Tab '''
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def __init__(self, widget_tab):
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super().__init__()
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self.path_icon = "./icons/"
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self.icon_update = self.path_icon + "update.png"
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self.inv_hc = AcousticInversionMethodHighConcentration()
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### --- General layout of widgets ---
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self.verticalLayoutMain = QVBoxLayout(widget_tab)
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self.horizontalLayoutTop = QHBoxLayout()
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self.verticalLayoutMain.addLayout(self.horizontalLayoutTop, 5) # 1O units is 100% , 1 units is 10%
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self.horizontalLayoutBottom = QHBoxLayout()
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self.verticalLayoutMain.addLayout(self.horizontalLayoutBottom, 5)
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# --------------------------------------------------------------------------------------------------------------
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self.groupbox_acoustic_data = QGroupBox()
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self.horizontalLayoutTop.addWidget(self.groupbox_acoustic_data, 6)
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self.groupbox_Mfine_profile = QGroupBox()
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self.horizontalLayoutTop.addWidget(self.groupbox_Mfine_profile, 4)
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# ++++++++++++++++++++++++++++++
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# +++ Groupbox acoustic data +++
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self.verticalLayout_groupbox_acoustic_data = QVBoxLayout(self.groupbox_acoustic_data)
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# self.horizontalLayout_acoustic_data_choice = QHBoxLayout()
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# self.verticalLayout_groupbox_acoustic_data.addLayout(self.horizontalLayout_acoustic_data_choice)
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self.gridLayout_data_choice = QGridLayout()
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self.verticalLayout_groupbox_acoustic_data.addLayout(self.gridLayout_data_choice)
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self.pushbutton_update_acoustic_file = QPushButton()
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self.pushbutton_update_acoustic_file.setIcon(QIcon(self.icon_update))
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# self.horizontalLayout_acoustic_data_choice.addWidget(self.pushbutton_update_acoustic_file)
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self.gridLayout_data_choice.addWidget(self.pushbutton_update_acoustic_file, 0, 0, 2, 1)
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self.combobox_acoustic_data_choice = QComboBox()
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# self.horizontalLayout_acoustic_data_choice.addWidget(self.combobox_acoustic_data_choice)
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self.gridLayout_data_choice.addWidget(self.combobox_acoustic_data_choice, 0, 1, 1, 1)
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self.combobox_freq1 = QComboBox()
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# self.horizontalLayout_acoustic_data_choice.addWidget(self.combobox_freq1)
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self.gridLayout_data_choice.addWidget(self.combobox_freq1, 0, 2, 1, 1)
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self.combobox_freq2 = QComboBox()
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# self.horizontalLayout_acoustic_data_choice.addWidget(self.combobox_freq2)
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self.gridLayout_data_choice.addWidget(self.combobox_freq2, 0, 3, 1, 1)
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# self.horizontalLayout_sample_data_choice = QHBoxLayout()
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# self.verticalLayout_groupbox_acoustic_data.addLayout(self.horizontalLayout_sample_data_choice)
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# self.label_fine_sample_choice = QLabel()
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# self.label_fine_sample_choice.setText("Fine sediments :")
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# self.horizontalLayout_sample_data_choice.addWidget(self.label_fine_sample_choice)
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self.combobox_fine_sample_choice = CheckableComboBox()
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# self.horizontalLayout_sample_data_choice.addWidget(self.combobox_fine_sample_choice)
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self.gridLayout_data_choice.addWidget(self.combobox_fine_sample_choice, 1, 1, 1, 1)
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# self.label_sand_sample_choice = QLabel()
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# self.label_sand_sample_choice.setText("Sand sediments :")
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# self.horizontalLayout_sample_data_choice.addWidget(self.label_sand_sample_choice)
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self.combobox_sand_sample_choice = CheckableComboBox()
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# self.horizontalLayout_sample_data_choice.addWidget(self.combobox_sand_sample_choice)
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self.gridLayout_data_choice.addWidget(self.combobox_sand_sample_choice, 1, 2, 1, 1)
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self.pushbutton_plot_sample = QPushButton()
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self.pushbutton_plot_sample.setText("Plot sample")
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# self.horizontalLayout_sample_data_choice.addWidget(self.pushbutton_plot_sample)
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self.gridLayout_data_choice.addWidget(self.pushbutton_plot_sample, 1, 3, 1, 1)
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self.canvas_BS = FigureCanvas()
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self.verticalLayout_groupbox_acoustic_data.addWidget(self.canvas_BS)
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# --------------------------------------------------------------------------------------------------------------
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# +++++++++++++++++++++++++++++++++++++++++++
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# +++ Groupbox Fine concentration profile +++
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self.verticalLayout_groupbox_Mfine_profile = QVBoxLayout(self.groupbox_Mfine_profile)
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self.canvas_Mfine = FigureCanvas()
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self.toolbar_Mfine = NavigationToolBar(self.canvas_Mfine, self)
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self.verticalLayout_groupbox_Mfine_profile.addWidget(self.toolbar_Mfine)
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self.verticalLayout_groupbox_Mfine_profile.addWidget(self.canvas_Mfine)
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# --------------------------------------------------------------------------------------------------------------
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self.groupbox_FCB = QGroupBox()
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self.horizontalLayoutBottom.addWidget(self.groupbox_FCB, 6)
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self.groupbox_sediment_calibration = QGroupBox()
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self.horizontalLayoutBottom.addWidget(self.groupbox_sediment_calibration, 4)
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# ++++++++++++++++++++
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# +++ Groupbox FCB +++
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self.verticalLayout_groupbox_FCB = QVBoxLayout(self.groupbox_FCB)
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self.canvas_FCB = FigureCanvas()
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self.toolbar_FCB = NavigationToolBar(self.canvas_FCB, self)
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self.verticalLayout_groupbox_FCB.addWidget(self.toolbar_FCB)
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self.verticalLayout_groupbox_FCB.addWidget(self.canvas_FCB)
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# +++++++++++++++++++++++++++++++++++++
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# +++ Groupbox sediment calibration +++
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self.groupbox_sediment_calibration.setTitle("Sediment calibration")
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self.gridLayout_groupbox_sediment_calibration = QGridLayout(self.groupbox_sediment_calibration)
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self.label_freq1 = QLabel("freq1")
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self.gridLayout_groupbox_sediment_calibration.addWidget(self.label_freq1, 0, 1, 1, 1)
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self.label_freq2 = QLabel("freq2")
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self.gridLayout_groupbox_sediment_calibration.addWidget(self.label_freq2, 0, 2, 1, 1)
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self.label_ks = QLabel()
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self.label_ks.setText("ks")
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self.gridLayout_groupbox_sediment_calibration.addWidget(self.label_ks, 1, 0, 1, 1)
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self.label_sv = QLabel()
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self.label_sv.setText("sv")
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self.gridLayout_groupbox_sediment_calibration.addWidget(self.label_sv, 2, 0, 1, 1)
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self.label_X = QLabel()
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self.label_X.setText("X")
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self.gridLayout_groupbox_sediment_calibration.addWidget(self.label_X, 3, 0, 1, 1)
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self.label_alphas = QLabel()
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self.label_alphas.setText("\u03B1s")
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self.gridLayout_groupbox_sediment_calibration.addWidget(self.label_alphas, 4, 0, 1, 1)
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self.label_zeta = QLabel()
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self.label_zeta.setText("\u03B6")
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self.gridLayout_groupbox_sediment_calibration.addWidget(self.label_zeta, 5, 0, 1, 1)
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# ==============================================================================================================
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# ---------------------------------------- Connect signal of widget --------------------------------------------
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# ==============================================================================================================
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self.pushbutton_update_acoustic_file.clicked.connect(self.function_pushbutton_update_acoustic_file)
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self.pushbutton_plot_sample.clicked.connect(self.function_pushbutton_plot_sample)
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# ==============================================================================================================
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# ----------------------------------- Functions for Signal processing Tab --------------------------------------
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# ==============================================================================================================
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def function_pushbutton_update_acoustic_file(self):
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self.update_acoustic_data()
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def function_pushbutton_plot_sample(self):
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self.sample_choice_for_calibration()
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self.plot_acoustic_recording()
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self.plot_profile_of_concentration_fine()
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def update_acoustic_data(self):
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self.combobox_acoustic_data_choice.clear()
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self.combobox_acoustic_data_choice.addItems(stg.filename_BS_raw_data)
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self.combobox_acoustic_data_choice.currentIndexChanged.connect(self.plot_acoustic_recording)
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self.combobox_freq1.clear()
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self.combobox_freq1.addItems(stg.freq_text[self.combobox_acoustic_data_choice.currentIndex()])
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self.combobox_freq2.clear()
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self.combobox_freq2.addItems(stg.freq_text[self.combobox_acoustic_data_choice.currentIndex()])
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self.combobox_freq2.currentIndexChanged.connect(self.plot_acoustic_recording)
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self.combobox_fine_sample_choice.clear()
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self.combobox_fine_sample_choice.addItems([f[0] for f in stg.sample_fine])
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self.combobox_sand_sample_choice.clear()
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self.combobox_sand_sample_choice.addItems([s[0] for s in stg.sample_sand])
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self.plot_acoustic_recording()
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def plot_acoustic_recording(self):
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self.verticalLayout_groupbox_acoustic_data.removeWidget(self.canvas_BS)
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self.fig_BS, self.axis_BS = plt.subplots(nrows=1, ncols=1, sharex=True, sharey=False, layout='constrained')
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self.canvas_BS = FigureCanvas(self.fig_BS)
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self.verticalLayout_groupbox_acoustic_data.addWidget(self.canvas_BS)
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if stg.BS_stream_bed[self.combobox_acoustic_data_choice.currentIndex()].shape != (0,):
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val_min = np.nanmin(
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stg.BS_stream_bed[self.combobox_acoustic_data_choice.currentIndex()][self.combobox_freq2.currentIndex(),
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:, :])
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val_max = np.nanmax(
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stg.BS_stream_bed[self.combobox_acoustic_data_choice.currentIndex()][self.combobox_freq2.currentIndex(),
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:, :])
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if val_min == 0:
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val_min = 1e-5
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self.axis_BS.pcolormesh(
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stg.time_cross_section[self.combobox_acoustic_data_choice.currentIndex()][
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self.combobox_freq2.currentIndex(), :],
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-stg.depth_cross_section[self.combobox_acoustic_data_choice.currentIndex()][
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self.combobox_freq2.currentIndex(), :],
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stg.BS_stream_bed[self.combobox_acoustic_data_choice.currentIndex()][self.combobox_freq2.currentIndex(),
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:, :],
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cmap='viridis', norm=LogNorm(vmin=val_min, vmax=val_max))
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elif stg.BS_cross_section[self.combobox_acoustic_data_choice.currentIndex()].shape != (0,):
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val_min = np.nanmin(
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stg.BS_cross_section[self.combobox_acoustic_data_choice.currentIndex()][
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self.combobox_freq2.currentIndex(), :, :])
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val_max = np.nanmax(
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stg.BS_cross_section[self.combobox_acoustic_data_choice.currentIndex()][
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self.combobox_freq2.currentIndex(), :, :])
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if val_min == 0:
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val_min = 1e-5
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self.axis_BS.pcolormesh(
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stg.time_cross_section[self.combobox_acoustic_data_choice.currentIndex()][
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self.combobox_freq2.currentIndex(), :],
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-stg.depth_cross_section[self.combobox_acoustic_data_choice.currentIndex()][
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self.combobox_freq2.currentIndex(), :],
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stg.BS_cross_section[self.combobox_acoustic_data_choice.currentIndex()][
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self.combobox_freq2.currentIndex(), :, :],
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cmap='viridis', norm=LogNorm(vmin=val_min, vmax=val_max))
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elif stg.BS_raw_data[self.combobox_acoustic_data_choice.currentIndex()].shape != (0,):
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val_min = np.nanmin(
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stg.BS_raw_data[self.combobox_acoustic_data_choice.currentIndex()][self.combobox_freq2.currentIndex(), :,
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:])
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val_max = np.nanmax(
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stg.BS_raw_data[self.combobox_acoustic_data_choice.currentIndex()][self.combobox_freq2.currentIndex(), :,
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:])
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if val_min == 0:
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val_min = 1e-5
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self.axis_BS.pcolormesh(
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stg.time[self.combobox_acoustic_data_choice.currentIndex()][self.combobox_freq2.currentIndex(), :],
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-stg.depth[self.combobox_acoustic_data_choice.currentIndex()][self.combobox_freq2.currentIndex(), :],
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stg.BS_raw_data[self.combobox_acoustic_data_choice.currentIndex()][self.combobox_freq2.currentIndex(), :,
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:],
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cmap='viridis', norm=LogNorm(vmin=val_min, vmax=val_max))
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print("stg.fine_sample_profile ", stg.fine_sample_profile)
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print("stg.sand_sample_target ", stg.sand_sample_target)
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if (stg.fine_sample_profile) or (stg.sand_sample_target):
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self.axis_BS.scatter([stg.time_fine[f[1]] for f in stg.fine_sample_profile],
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[stg.depth_fine[f[1]] for f in stg.fine_sample_profile],
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marker='o', s=20, facecolor="k", edgecolor="None")
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self.axis_BS.scatter([stg.time_sand[s[1]] for s in stg.sand_sample_target],
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[stg.depth_sand[s[1]] for s in stg.sand_sample_target],
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marker='o', s=50, facecolor="None", edgecolor="k")
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for i in stg.fine_sample_profile:
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self.axis_BS.text(stg.time_fine[i[1]] + 5, stg.depth_fine[i[1]] - .2, i[0],
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fontstyle="normal", fontweight="light", fontsize=8)
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for j in stg.sand_sample_target:
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self.axis_BS.text(stg.time_sand[j[1]] - 12, stg.depth_sand[j[1]] - .2, j[0],
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fontstyle="normal", fontweight="light", fontsize=8)
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elif (stg.sample_fine) or (stg.sample_sand):
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self.axis_BS.scatter(stg.time_fine, stg.depth_fine, marker='o', s=20, facecolor="k", edgecolor="None")
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self.axis_BS.scatter(stg.time_sand, stg.depth_sand, marker='o', s=50, facecolor="None", edgecolor="k")
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for i in stg.sample_fine:
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self.axis_BS.text(stg.time_fine[i[1]] + 5, stg.depth_fine[i[1]] - .2, i[0],
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fontstyle="normal", fontweight="light", fontsize=8)
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for j in stg.sample_sand:
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self.axis_BS.text(stg.time_sand[j[1]] - 12, stg.depth_sand[j[1]] - .2, j[0],
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fontstyle="normal", fontweight="light", fontsize=8)
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# self.axis_BS.set_xticks([])
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# self.axis_BS.set_yticks([])
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self.axis_BS.set_xlabel("Time (sec)")
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self.axis_BS.set_ylabel("Depth (m)")
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self.fig_BS.canvas.draw_idle()
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def sample_choice_for_calibration(self):
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# --- List selected fine samples ---
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stg.fine_sample_profile = [(f, int(f[1:]) - 1) for f in self.combobox_fine_sample_choice.currentData()]
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print(f"stg.fine_sample_profile : {stg.fine_sample_profile}")
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# --- List selected sand samples ---
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stg.sand_sample_target = [(s, int(s[1:]) - 1) for s in self.combobox_sand_sample_choice.currentData()]
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print(f"stg.sand_sample_target : {stg.sand_sample_target}")
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def plot_profile_of_concentration_fine(self):
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if stg.depth_cross_section[self.combobox_acoustic_data_choice.currentIndex()].shape != (0,):
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print("test find indice of time ", np.where( np.abs(stg.time_cross_section[self.combobox_acoustic_data_choice.currentIndex()][self.combobox_freq2.currentIndex(), :]
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- (stg.time_fine[stg.fine_sample_profile[-1][1]])) ==
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np.nanmin(np.abs(stg.time_cross_section[self.combobox_acoustic_data_choice.currentIndex()][self.combobox_freq2.currentIndex(), :]
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- (stg.time_fine[stg.fine_sample_profile[-1][1]]))) ))
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print(stg.time_cross_section[self.combobox_acoustic_data_choice.currentIndex()][self.combobox_freq2.currentIndex(), :])
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print(stg.time_fine[stg.fine_sample_profile[-1][1]])
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range_lin_interp, M_profile_fine = (
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self.inv_hc.M_profile_SCC_fine_interpolated(
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sample_depth=[-stg.depth_fine[k[1]] for k in stg.fine_sample_profile],
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M_profile=[stg.Ctot_fine[k[1]] for k in stg.fine_sample_profile],
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range_cells=stg.depth_cross_section[self.combobox_acoustic_data_choice.currentIndex()][self.combobox_freq2.currentIndex(), :],
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r_bottom=stg.depth_bottom[self.combobox_acoustic_data_choice.currentIndex()]
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[
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np.where( np.abs(stg.time_cross_section[self.combobox_acoustic_data_choice.currentIndex()][self.combobox_freq2.currentIndex(), :]
|
||||
- stg.time_fine[stg.fine_sample_profile[-1][1]]) ==
|
||||
np.nanmin(np.abs(stg.time_cross_section[self.combobox_acoustic_data_choice.currentIndex()][self.combobox_freq2.currentIndex(), :]
|
||||
- stg.time_fine[stg.fine_sample_profile[-1][1]])) )[0][0]
|
||||
]
|
||||
)
|
||||
)
|
||||
# print(f"range_lin_interp : {range_lin_interp}")
|
||||
# print(f"M_profile_fine : {M_profile_fine}")
|
||||
else:
|
||||
range_lin_interp, M_profile_fine = (
|
||||
self.inv_hc.M_profile_SCC_fine_interpolated(
|
||||
sample_depth=[-stg.depth_fine[k[1]] for k in stg.fine_sample_profile],
|
||||
M_profile=[stg.Ctot_fine[k[1]] for k in stg.fine_sample_profile],
|
||||
range_cells=stg.depth[self.combobox_acoustic_data_choice.currentIndex()][self.combobox_freq2.currentIndex(), :],
|
||||
r_bottom=stg.depth_bottom[self.combobox_acoustic_data_choice.currentIndex()]))
|
||||
|
||||
M_profile_fine = M_profile_fine[:len(range_lin_interp)]
|
||||
print(f"M_profile_fine : {M_profile_fine}")
|
||||
|
||||
# --- Plot profile of the concentration of the fine sediments ---
|
||||
self.verticalLayout_groupbox_Mfine_profile.removeWidget(self.canvas_Mfine)
|
||||
self.verticalLayout_groupbox_Mfine_profile.removeWidget(self.toolbar_Mfine)
|
||||
self.fig_Mfine, self.ax_Mfine = plt.subplots(1, 1, layout="constrained")
|
||||
self.canvas_Mfine = FigureCanvas(self.fig_Mfine)
|
||||
self.toolbar_Mfine = NavigationToolBar(self.canvas_Mfine, self)
|
||||
self.verticalLayout_groupbox_Mfine_profile.addWidget(self.toolbar_Mfine)
|
||||
self.verticalLayout_groupbox_Mfine_profile.addWidget(self.canvas_Mfine)
|
||||
|
||||
self.ax_Mfine.plot([stg.Ctot_fine[c] for _, c in stg.fine_sample_profile],
|
||||
[stg.depth_fine[c] for _, c in stg.fine_sample_profile],
|
||||
marker="o", mfc="k", mec="k", ms=12, ls="None")
|
||||
|
||||
self.ax_Mfine.plot(M_profile_fine[:len(range_lin_interp)], -range_lin_interp,
|
||||
marker="*", mfc="b", mec="b", ms=8, ls="None")
|
||||
|
||||
self.ax_Mfine.set_xlabel("Concentration fine sediments (g/L)")
|
||||
self.ax_Mfine.set_ylabel("Depth (m)")
|
||||
|
||||
for i in stg.fine_sample_profile:
|
||||
self.ax_Mfine.text(stg.time_fine[i[1]], stg.depth_fine[i[1]] - .05, i[0],
|
||||
fontstyle="normal", fontweight="light", fontsize=12)
|
||||
|
||||
self.ax_Mfine.set_xlabel("Fine sediments concentration (g/L)")
|
||||
self.ax_Mfine.set_ylabel("Depth (m)")
|
||||
|
||||
def range_cells_function(self):
|
||||
""" Computing the real cell size, that depends on the temperature """
|
||||
|
||||
# defaut Aquascat cell size
|
||||
aquascat_cell_size = stg.r[0, 1] - stg.r[0, 0]
|
||||
# Pulse duration
|
||||
tau = aquascat_cell_size * 2 / 1500 # figure 2.9 1500 vitesse du son entrée pour le paramètrage des mesures aquascat
|
||||
# Sound speed
|
||||
cel = self.inv_hc.water_velocity(self.spinbox_temperature_water_attenuation.value())
|
||||
# Real cell size
|
||||
real_cell_size = cel * tau / 2 # voir fig 2.9
|
||||
|
||||
# Converting to real cell profile
|
||||
real_r = stg.r / aquascat_cell_size * real_cell_size # (/ aquascat_cell_size) pour ramener BS.r entre 0 et 1
|
||||
# (* real_cell_size) pour remettre les échelles spatiales sur la taille réelle des cellules
|
||||
|
||||
# R with right shape (numpy array)
|
||||
R_real = real_r # np.repeat(real_r, len(stg.freq), axis=1)
|
||||
|
||||
return R_real
|
||||
|
||||
|
||||
def compute_FCB(self):
|
||||
|
||||
print(f"self.range_cells_function() : {self.range_cells_function()}")
|
||||
print(f"self.range_cells_function() shape : {self.range_cells_function().shape}")
|
||||
R_real = np.repeat(self.range_cells_function()[:, :, np.newaxis], stg.t.shape[1], axis=2)
|
||||
print(f"R_real shape : {R_real.shape}")
|
||||
if (stg.BS_stream_bed_pre_process_average.size == 0) and (stg.BS_stream_bed_pre_process_SNR.size == 0):
|
||||
stg.FCB = (np.log(stg.BS_stream_bed) + np.log(R_real) +
|
||||
2 * stg.water_attenuation * R_real)
|
||||
elif stg.BS_stream_bed_pre_process_SNR.size == 0:
|
||||
stg.FCB = (np.log(stg.BS_stream_bed_pre_process_average) + np.log(R_real) +
|
||||
2 * stg.water_attenuation * R_real)
|
||||
else:
|
||||
stg.FCB = (np.log(stg.BS_stream_bed_pre_process_SNR) + np.log(R_real) +
|
||||
2 * stg.water_attenuation * R_real)
|
||||
self.plot_FCB()
|
||||
|
||||
# def fit_FCB_profile_with_linear_regression_and_compute_alphaS(self):
|
||||
#
|
||||
# if stg.FCB.size == 0:
|
||||
# msgBox = QMessageBox()
|
||||
# msgBox.setWindowTitle("Linear regression error")
|
||||
# msgBox.setIcon(QMessageBox.Warning)
|
||||
# msgBox.setText("Please compute FCB before")
|
||||
# msgBox.setStandardButtons(QMessageBox.Ok)
|
||||
# msgBox.exec()
|
||||
# else:
|
||||
# try:
|
||||
# y0 = stg.FCB[self.combobox_frequency_compute_alphaS.currentIndex(), :, self.slider.value()]
|
||||
# y = y0[np.where(np.isnan(y0) == False)]
|
||||
#
|
||||
# x0 = stg.r[0, :].reshape(-1)
|
||||
# x = x0[np.where(np.isnan(y0) == False)]
|
||||
#
|
||||
# value1 = np.where(np.round(np.abs(x - self.spinbox_alphaS_computation_from.value()), 2)
|
||||
# == np.min(np.round(np.abs(x - self.spinbox_alphaS_computation_from.value()), 2)))
|
||||
# value2 = np.where(np.round(np.abs(x - self.spinbox_alphaS_computation_to.value()), 2)
|
||||
# == np.min(np.round(np.abs(x - self.spinbox_alphaS_computation_to.value()), 2)))
|
||||
#
|
||||
# # print(np.round(np.abs(x - self.spinbox_alphaS_computation_from.value()), 2))
|
||||
# # # print("value1 ", value1[0][0])
|
||||
# # print(np.round(np.abs(x - self.spinbox_alphaS_computation_to.value()), 2))
|
||||
# # print("value2 ", value2[0][0])
|
||||
#
|
||||
# # print("y limited ", y[value1[0][0]:value2[0][0]])
|
||||
#
|
||||
# lin_reg_compute = stats.linregress(x[value1[0][0]:value2[0][0]], y[value1[0][0]:value2[0][0]])
|
||||
# except ValueError:
|
||||
# msgBox = QMessageBox()
|
||||
# msgBox.setWindowTitle("Linear regression error")
|
||||
# msgBox.setIcon(QMessageBox.Warning)
|
||||
# msgBox.setText("Please check boundaries to fit a linear line")
|
||||
# msgBox.setStandardButtons(QMessageBox.Ok)
|
||||
# msgBox.exec()
|
||||
# else:
|
||||
# stg.lin_reg = (lin_reg_compute.slope, lin_reg_compute.intercept)
|
||||
# # print(f"y = {stg.lin_reg[0]}x + {stg.lin_reg[1]}")
|
||||
#
|
||||
# self.label_alphaS.clear()
|
||||
# self.label_alphaS.setText(f"\u03B1s = {-0.5*stg.lin_reg[0]:.4f} dB/m")
|
||||
#
|
||||
# # for i, value_freq in enumerate(stg.freq):
|
||||
# # for k, value_t in enumerate(stg.t):
|
||||
# # # print(f"indice i: {i}, indice k: {k}")
|
||||
# # # print(f"values of FCB: {stg.FCB[:, i, k]}")
|
||||
# # y = stg.FCB[:, i, k]
|
||||
# # # print("y : ", y)
|
||||
# # # print(f"values of FCB where FCB is not Nan {y[np.where(np.isnan(y) == False)]}")
|
||||
# # # print(f"values of r where FCB is not Nan {x[np.where(np.isnan(y) == False)]}")
|
||||
# # lin_reg_compute = stats.linregress(x[np.where(np.isnan(y) == False)], y[np.where(np.isnan(y) == False)])
|
||||
# # lin_reg_tuple = (lin_reg_compute.slope, lin_reg_compute.intercept)
|
||||
# # stg.lin_reg.append(lin_reg_tuple)
|
||||
#
|
||||
# # print(f"y = {lin_reg.slope}x + {lin_reg.intercept}")
|
||||
#
|
||||
# # plt.figure()
|
||||
# # plt.plot(stg.r, stg.FCB[:, 0, 825], 'k-', stg.r, lin_reg.slope*stg.r + lin_reg.intercept, "b--")
|
||||
# # plt.show()
|
||||
#
|
||||
# # print("lin_reg length ", len(stg.lin_reg))
|
||||
# # print("lin_reg ", stg.lin_reg)
|
||||
|
||||
|
||||
|
||||
# print([stg.time_fine[c] for _, c in stg.fine_sample_profile])
|
||||
# print([stg.depth_fine[c] for _, c in stg.fine_sample_profile])
|
||||
|
||||
# --- Plot positions of the samples selected in comboboxes ---
|
||||
# self.scat.set_array(np.array([[stg.time_fine[c] for _, c in stg.fine_sample_profile],
|
||||
# [stg.depth_fine[c] for _, c in stg.fine_sample_profile]]).transpose())
|
||||
# self.scat.set_array(np.array([[stg.time_fine[c] for _, c in stg.fine_sample_profile],
|
||||
# [stg.depth_fine[c] for _, c in stg.fine_sample_profile]]).transpose())
|
||||
|
||||
# self.gridLayout_groupbox_data_choice = QGridLayout(self.groupbox_acoustic_data_choice)
|
||||
#
|
||||
# self.gridLayout_groupbox_data_choice.addWidget(self.combobox_acoustic_data_choice, 0, 0, 1, 4)
|
||||
# self.combobox_acoustic_data_choice.addItems(["acoustic data 1", "acoustic data 2", "acoustic data 3"])
|
||||
#
|
||||
# self.label_temperature = QLabel("Temperature = ")
|
||||
# self.gridLayout_groupbox_data_choice.addWidget(self.label_temperature, 1, 0, 1, 1)
|
||||
#
|
||||
# self.label_temperature_value = QLabel("7 °C")
|
||||
# self.gridLayout_groupbox_data_choice.addWidget(self.label_temperature_value, 1, 1, 1, 1)
|
||||
#
|
||||
# self.label_sound_velocity = QLabel("Sound velocity (m/s) = ")
|
||||
# self.gridLayout_groupbox_data_choice.addWidget(self.label_sound_velocity, 1, 2, 1, 1)
|
||||
#
|
||||
# self.spinbox_sound_velocity_value = QSpinBox()
|
||||
# self.gridLayout_groupbox_data_choice.addWidget(self.spinbox_sound_velocity_value, 1, 3, 1, 1)
|
||||
#
|
||||
# self.label_freq1 = QLabel("freq 1:")
|
||||
# self.gridLayout_groupbox_data_choice.addWidget(self.label_freq1, 2, 0, 1, 1)
|
||||
# self.combobox_freq1 = QComboBox()
|
||||
# self.combobox_freq1.addItems(["0.3 MHz", "0.5 MHz", "1 MHz", "5 MHz"])
|
||||
# self.gridLayout_groupbox_data_choice.addWidget(self.combobox_freq1, 2, 1, 1, 1)
|
||||
#
|
||||
# self.label_freq2 = QLabel("freq 2:")
|
||||
# self.gridLayout_groupbox_data_choice.addWidget(self.label_freq2, 2, 2, 1, 1)
|
||||
# self.combobox_freq2 = QComboBox()
|
||||
# self.combobox_freq2.addItems(["0.3 MHz", "0.5 MHz", "1 MHz", "5 MHz"])
|
||||
# self.gridLayout_groupbox_data_choice.addWidget(self.combobox_freq2, 2, 3, 1, 1)
|
||||
#
|
||||
# self.label_kt = QLabel("kt = :")
|
||||
# self.gridLayout_groupbox_data_choice.addWidget(self.label_kt, 3, 0, 1, 1)
|
||||
#
|
||||
# self.spinbox_kt_freq1 = QDoubleSpinBox()
|
||||
# self.spinbox_kt_freq1.setDecimals(5)
|
||||
# self.gridLayout_groupbox_data_choice.addWidget(self.spinbox_kt_freq1, 3, 1, 1, 1)
|
||||
#
|
||||
# self.spinbox_kt_freq2 = QDoubleSpinBox()
|
||||
# self.spinbox_kt_freq2.setDecimals(5)
|
||||
# self.gridLayout_groupbox_data_choice.addWidget(self.spinbox_kt_freq2, 3, 3, 1, 1)
|
||||
#
|
||||
# self.groupbox_acoustic_data_plot = QGroupBox()
|
||||
# self.verticalLayout_groupbox_acoustic_data_plot = QVBoxLayout(self.groupbox_acoustic_data_plot)
|
||||
# self.gridLayout_groupbox_data_choice.addWidget(self.groupbox_acoustic_data_plot, 4, 0, 1, 4)
|
||||
#
|
||||
# self.fig_acoustic, self.ax_acoustic = plt.subplots(nrows=1, ncols=1, layout="constrained")
|
||||
# self.canvas_fig_acoustic = FigureCanvas(self.fig_acoustic)
|
||||
# self.verticalLayout_groupbox_acoustic_data_plot.addWidget(self.canvas_fig_acoustic)
|
||||
|
||||
|
||||
|
||||
|
||||
Loading…
Reference in New Issue