Acoustic data: Some refactoring.
parent
2ad980248d
commit
99103bc98a
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@ -1396,7 +1396,6 @@ class AcousticDataTab(QWidget):
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self.open_acoustic_data()
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@trace
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def open_acoustic_data(self):
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# --- Fill lineEdit with path and file names + load acoustic data ---
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# --- fill date, hour and measurements information + fill frequency combobox for bottom detection ---
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@ -2168,209 +2167,344 @@ class AcousticDataTab(QWidget):
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if self.fileListWidget.currentRow() == -1:
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return
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file_id = self.fileListWidget.currentRow()
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data_id = self.fileListWidget.currentRow()
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tmin_indice = np.where(
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np.abs(
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stg.time[file_id][0, :] - np.nanmin(stg.time[file_id][0, :])
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stg.time[data_id][0, :] - np.nanmin(stg.time[data_id][0, :])
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) == np.nanmin(
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np.abs(
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stg.time[file_id][0, :]
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- np.nanmin(stg.time[file_id][0, :])
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stg.time[data_id][0, :]
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- np.nanmin(stg.time[data_id][0, :])
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)
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)
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)[0][0]
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tmin_value = np.round(
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np.nanmin(stg.time[file_id][0, :]), 2
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np.nanmin(stg.time[data_id][0, :]), 2
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)
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stg.tmin[file_id] = (tmin_indice, tmin_value)
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stg.tmin[data_id] = (tmin_indice, tmin_value)
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tmax_indice = np.where(
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np.abs(
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stg.time[file_id][0, :] - np.nanmax(stg.time[file_id][0, :])
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stg.time[data_id][0, :] - np.nanmax(stg.time[data_id][0, :])
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) == np.nanmin(
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np.abs(
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stg.time[file_id][0, :]
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- np.nanmax(stg.time[file_id][0, :])
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stg.time[data_id][0, :]
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- np.nanmax(stg.time[data_id][0, :])
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)
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)
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)[0][0]
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tmax_value = np.round(np.nanmax(stg.time[file_id][0, :]), 2)
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stg.tmax[file_id] = (tmax_indice + 1, tmax_value)
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tmax_value = np.round(np.nanmax(stg.time[data_id][0, :]), 2)
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stg.tmax[data_id] = (tmax_indice + 1, tmax_value)
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self.set_range_for_time_boundaries_option()
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def set_range_for_time_boundaries_option(self):
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data_id = self.fileListWidget.currentRow()
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self.label_time_min.clear()
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self.label_time_min.setText("%.5s" % str(stg.time[self.fileListWidget.currentRow()][0, 0]))
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self.label_time_min.setText(
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f"{stg.time[data_id][0, 0]:.1f}"
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)
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self.label_time_max.clear()
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self.label_time_max.setText("%.5s" % str(stg.time[self.fileListWidget.currentRow()][0, -1]))
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if stg.time_cross_section[self.fileListWidget.currentRow()].shape != (0,):
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self.lineEdit_time_min_limits.setText("%.5s" % str(stg.time_cross_section[self.fileListWidget.currentRow()][0, 0]))
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self.lineEdit_time_max_limits.setText("%.5s" % str(stg.time_cross_section[self.fileListWidget.currentRow()][0, -1]))
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self.label_time_max.setText(
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f"{stg.time[data_id][0, -1]:.1f}"
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)
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if stg.time_cross_section[data_id].shape != (0,):
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self.lineEdit_time_min_limits.setText(
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f"{stg.time_cross_section[data_id][0, 0]:.1f}"
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)
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self.lineEdit_time_max_limits.setText(
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f"{stg.time_cross_section[data_id][0, -1]:.1f}"
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)
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else:
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self.lineEdit_time_min_limits.setText("%.5s" % str(stg.time[self.fileListWidget.currentRow()][0, 0]))
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self.lineEdit_time_max_limits.setText("%.5s" % str(stg.time[self.fileListWidget.currentRow()][0, -1]))
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self.lineEdit_time_min_limits.setText(
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f"{stg.time[data_id][0, 0]:.1f}"
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)
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self.lineEdit_time_max_limits.setText(
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f"{stg.time[data_id][0, -1]:.1f}"
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)
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def compute_time_cross_section(self):
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''' tmin and tmax are updated with double slider of time '''
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data_id = max(0, self.fileListWidget.currentRow())
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time_min = float(self.lineEdit_time_min_limits.text().replace(",", "."))
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time_max = float(self.lineEdit_time_max_limits.text().replace(",", "."))
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stg.tmin[self.fileListWidget.currentRow()] = ((
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np.where(np.abs(np.round(stg.time[self.fileListWidget.currentRow()][0, :], 2) -
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float(self.lineEdit_time_min_limits.text().replace(",", "."))) ==
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np.nanmin(np.abs(np.round(stg.time[self.fileListWidget.currentRow()][0, :],
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2) - float(self.lineEdit_time_min_limits.text().replace(",", ".")))))[0][0],
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float(self.lineEdit_time_min_limits.text().replace(",", "."))
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stg.tmin[data_id] = ((
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np.where(
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np.abs(
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np.round(
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stg.time[data_id][0, :], 2
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) - time_min
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) == np.nanmin(
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np.abs(
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np.round(
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stg.time[data_id][0, :], 2
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) - time_min
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)
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)
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)[0][0],
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time_min
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))
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stg.tmax[self.fileListWidget.currentRow()] = ((
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np.where(np.abs(np.round(stg.time[self.fileListWidget.currentRow()][0, :], 2) -
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float(self.lineEdit_time_max_limits.text().replace(",", "."))) ==
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np.nanmin(np.abs(np.round(stg.time[self.fileListWidget.currentRow()][0, :],
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2) - float(self.lineEdit_time_max_limits.text().replace(",", ".")))))[0][0]+1,
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float(self.lineEdit_time_max_limits.text().replace(",", "."))
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stg.tmax[data_id] = ((
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np.where(
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np.abs(
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np.round(
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stg.time[data_id][0, :], 2)
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- time_max
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) == np.nanmin(
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np.abs(
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np.round(
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stg.time[data_id][0, :],2)
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- time_max
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)
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)
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)[0][0] + 1,
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time_max
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))
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stg.time_cross_section[self.fileListWidget.currentRow()] = (
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stg.time[self.fileListWidget.currentRow()][:, stg.tmin[self.fileListWidget.currentRow()][0]:
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stg.tmax[self.fileListWidget.currentRow()][0]]
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stg.time_cross_section[data_id] = (
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stg.time[data_id][
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:, stg.tmin[data_id][0]: stg.tmax[data_id][0]
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]
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)
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def compute_rmin_rmax(self):
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''' rmin and rmax are filled with min and max of depth when data are uploaded and
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double slider of depth are updated with these values '''
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if self.fileListWidget.currentRow() != -1:
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if self.fileListWidget.currentRow() == -1:
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return
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data_id = self.fileListWidget.currentRow()
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# --- rmim / rmax ---
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rmin_indice = np.where(np.abs(stg.depth[self.fileListWidget.currentRow()][0, :] - np.nanmin(
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stg.depth[self.fileListWidget.currentRow()][0, :])) ==
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np.nanmin(np.abs(stg.depth[self.fileListWidget.currentRow()][0, :] - np.nanmin(
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stg.depth[self.fileListWidget.currentRow()][0, :]))))[0][0]
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rmin_value = np.round(np.nanmin(stg.depth[self.fileListWidget.currentRow()][0, :]), 2)
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stg.rmin[self.fileListWidget.currentRow()] = (rmin_indice, rmin_value)
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rmin_indice = np.where(
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np.abs(
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stg.depth[data_id][0, :] - np.nanmin(stg.depth[data_id][0, :])
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) == np.nanmin(
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np.abs(
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stg.depth[data_id][0, :]
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- np.nanmin(stg.depth[data_id][0, :])
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)
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)
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)[0][0]
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rmax_indice = np.where(np.abs(stg.depth[self.fileListWidget.currentRow()][0, :] - np.nanmax(
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stg.depth[self.fileListWidget.currentRow()][0, :])) ==
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np.nanmin(np.abs(stg.depth[self.fileListWidget.currentRow()][0, :] - np.nanmax(
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stg.depth[self.fileListWidget.currentRow()][0, :]))))[0][0]
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rmax_value = np.round(np.nanmax(stg.depth[self.fileListWidget.currentRow()][0, :]), 2)
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stg.rmax[self.fileListWidget.currentRow()] = (rmax_indice + 1, rmax_value)
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rmin_value = np.round(np.nanmin(stg.depth[data_id][0, :]), 2)
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stg.rmin[data_id] = (rmin_indice, rmin_value)
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rmax_indice = np.where(
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np.abs(
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stg.depth[data_id][0, :] - np.nanmax(stg.depth[data_id][0, :])
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) == np.nanmin(
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np.abs(
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stg.depth[data_id][0, :]
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- np.nanmax(stg.depth[data_id][0, :])
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)
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)
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)[0][0]
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rmax_value = np.round(np.nanmax(stg.depth[data_id][0, :]), 2)
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stg.rmax[data_id] = (rmax_indice + 1, rmax_value)
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self.set_range_for_depth_boundaries_option()
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def set_range_for_depth_boundaries_option(self):
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data_id = self.fileListWidget.currentRow()
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self.label_depth_min.clear()
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self.label_depth_min.setText("-" + str("%.5s" % stg.depth[self.fileListWidget.currentRow()][0, -1]))
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self.label_depth_min.setText("-" + str("%.5s" % stg.depth[data_id][0, -1]))
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self.label_depth_max.clear()
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self.label_depth_max.setText("-" + str("%.5s" % stg.depth[self.fileListWidget.currentRow()][0, 0]))
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if stg.depth_cross_section[self.fileListWidget.currentRow()].shape != (0,):
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self.lineEdit_depth_min_limits.setText("-" + str("%.5s" % stg.depth_cross_section[self.fileListWidget.currentRow()][0, -1]))
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self.lineEdit_depth_max_limits.setText("-" + str("%.5s" % stg.depth_cross_section[self.fileListWidget.currentRow()][0, 0]))
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self.label_depth_max.setText("-" + str("%.5s" % stg.depth[data_id][0, 0]))
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if stg.depth_cross_section[data_id].shape != (0,):
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self.lineEdit_depth_min_limits.setText(
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"-" + str("%.5s" % stg.depth_cross_section[data_id][0, -1])
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)
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self.lineEdit_depth_max_limits.setText(
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"-" + str("%.5s" % stg.depth_cross_section[data_id][0, 0])
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)
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else:
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self.lineEdit_depth_min_limits.setText("-" + str("%.5s" % stg.depth[self.fileListWidget.currentRow()][0, -1]))
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self.lineEdit_depth_max_limits.setText("-" + str("%.5s" % stg.depth[self.fileListWidget.currentRow()][0, 0]))
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self.lineEdit_depth_min_limits.setText(
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"-" + str("%.5s" % stg.depth[data_id][0, -1])
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)
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self.lineEdit_depth_max_limits.setText(
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"-" + str("%.5s" % stg.depth[data_id][0, 0])
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)
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def compute_depth_cross_section(self):
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''' rmin and rmax are updated with double slider of depth '''
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data_id = self.fileListWidget.currentRow()
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stg.rmin[self.fileListWidget.currentRow()] = ((
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np.where(np.abs(np.round(stg.depth[self.fileListWidget.currentRow()][0, :], 2) -
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float("".join(findall("[.0-9]", self.lineEdit_depth_max_limits.text())))) ==
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np.nanmin(np.abs(np.round(stg.depth[self.fileListWidget.currentRow()][0, :],
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2) - (float("".join(findall("[.0-9]", self.lineEdit_depth_max_limits.text()))))
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)))[0][0]+1,
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float("".join(findall("[.0-9]", self.lineEdit_depth_max_limits.text())))
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stg.rmin[data_id] = ((
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np.where(
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np.abs(
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np.round(
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stg.depth[data_id][0, :], 2
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) - float(
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"".join(
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findall(
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"[.0-9]",
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self.lineEdit_depth_max_limits.text()
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)
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)
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)
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) == np.nanmin(
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np.abs(
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np.round(stg.depth[data_id][0, :], 2)
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- float(
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"".join(
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findall(
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"[.0-9]",
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self.lineEdit_depth_max_limits.text()
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)
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)
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)
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)
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)
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)[0][0]+1,
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float(
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"".join(
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findall(
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"[.0-9]",
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self.lineEdit_depth_max_limits.text()
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)
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)
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)
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))
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stg.rmax[self.fileListWidget.currentRow()] = ((
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np.where(np.abs(np.round(stg.depth[self.fileListWidget.currentRow()][0, :], 2) -
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float("".join(findall("[.0-9]", self.lineEdit_depth_min_limits.text())))) ==
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np.nanmin(np.abs(np.round(stg.depth[self.fileListWidget.currentRow()][0, :],
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2) - (float("".join(findall("[.0-9]", self.lineEdit_depth_min_limits.text()))))
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)))[0][0],
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float("".join(findall("[.0-9]", self.lineEdit_depth_min_limits.text())))
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stg.rmax[data_id] = ((
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np.where(
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np.abs(
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np.round(
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stg.depth[data_id][0, :], 2
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) - float(
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"".join(
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findall(
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"[.0-9]",
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self.lineEdit_depth_min_limits.text()
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)
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)
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)
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) == np.nanmin(
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np.abs(
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np.round(stg.depth[data_id][0, :], 2)
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- float(
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"".join(
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findall(
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"[.0-9]",
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self.lineEdit_depth_min_limits.text()
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)
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)
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)
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)
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)
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)[0][0],
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float(
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"".join(
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findall(
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"[.0-9]",
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self.lineEdit_depth_min_limits.text()
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)
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)
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)
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))
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stg.depth_cross_section[self.fileListWidget.currentRow()] = (
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stg.depth[self.fileListWidget.currentRow()][:,
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stg.rmin[self.fileListWidget.currentRow()][0]:stg.rmax[self.fileListWidget.currentRow()][0]]
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stg.depth_cross_section[data_id] = (
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stg.depth[data_id][:,
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stg.rmin[data_id][0]:stg.rmax[data_id][0]]
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)
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def compute_BS_cross_section(self):
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if self.fileListWidget.currentRow() != -1:
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if self.fileListWidget.currentRow() == -1:
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return
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data_id = self.fileListWidget.currentRow()
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self.compute_depth_cross_section()
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self.compute_time_cross_section()
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stg.BS_cross_section[self.fileListWidget.currentRow()] = (
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stg.BS_raw_data[self.fileListWidget.currentRow()]
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[:, stg.rmin[self.fileListWidget.currentRow()][0]:stg.rmax[self.fileListWidget.currentRow()][0],
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stg.tmin[self.fileListWidget.currentRow()][0]:stg.tmax[self.fileListWidget.currentRow()][0]])
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stg.BS_cross_section[data_id] = (
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stg.BS_raw_data[data_id][
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:,
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stg.rmin[data_id][0]:stg.rmax[data_id][0],
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stg.tmin[data_id][0]:stg.tmax[data_id][0]
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]
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)
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def update_frequency_combobox(self):
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if self.fileListWidget.currentRow() != -1:
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data_id = self.fileListWidget.currentRow()
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if data_id == -1:
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return
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self.combobox_frequency_bathymetry.clear()
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self.combobox_frequency_bathymetry.addItems([f for f in stg.freq_text[self.fileListWidget.currentRow()]])
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self.combobox_frequency_bathymetry.addItems(
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[f for f in stg.freq_text[data_id]]
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)
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self.combobox_frequency_profile.clear()
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self.combobox_frequency_profile.addItems([f for f in stg.freq_text[self.fileListWidget.currentRow()]])
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self.combobox_frequency_profile.addItems(
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[f for f in stg.freq_text[data_id]]
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)
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def set_range_for_doubleRangeSlider_intg_area(self):
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if self.fileListWidget.currentRow() != -1:
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if self.fileListWidget.currentRow() == -1:
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return
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if stg.depth_cross_section[self.fileListWidget.currentRow()].shape == (0,):
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data_id = self.fileListWidget.currentRow()
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if stg.depth_cross_section[data_id].shape == (0,):
|
||||
self.doubleRangeSlider_intg_area.setRange(
|
||||
min=-stg.depth[self.fileListWidget.currentRow()][0, -1],
|
||||
max=-stg.depth[self.fileListWidget.currentRow()][0, 0])
|
||||
min=-stg.depth[data_id][0, -1],
|
||||
max=-stg.depth[data_id][0, 0]
|
||||
)
|
||||
|
||||
self.doubleRangeSlider_intg_area.setValue(
|
||||
value=(-stg.depth[self.fileListWidget.currentRow()][0, -1],
|
||||
-stg.depth[self.fileListWidget.currentRow()][0, 0]))
|
||||
|
||||
value=(
|
||||
-stg.depth[data_id][0, -1],
|
||||
-stg.depth[data_id][0, 0]
|
||||
)
|
||||
)
|
||||
else:
|
||||
|
||||
self.doubleRangeSlider_intg_area.setRange(
|
||||
min=-stg.depth_cross_section[self.fileListWidget.currentRow()][0, -1],
|
||||
max=-stg.depth_cross_section[self.fileListWidget.currentRow()][0, 0])
|
||||
min=-stg.depth_cross_section[data_id][0, -1],
|
||||
max=-stg.depth_cross_section[data_id][0, 0]
|
||||
)
|
||||
|
||||
self.doubleRangeSlider_intg_area.setValue(
|
||||
value=(-stg.depth_cross_section[self.fileListWidget.currentRow()][0, -1],
|
||||
-stg.depth_cross_section[self.fileListWidget.currentRow()][0, 0]))
|
||||
value=(
|
||||
-stg.depth_cross_section[data_id][0, -1],
|
||||
-stg.depth_cross_section[data_id][0, 0]
|
||||
)
|
||||
)
|
||||
|
||||
def set_range_for_spinboxes_bathymetry(self):
|
||||
if self.fileListWidget.currentRow() != -1:
|
||||
if self.fileListWidget.currentRow() == -1:
|
||||
return
|
||||
|
||||
if stg.depth_cross_section[self.fileListWidget.currentRow()].shape != (0,):
|
||||
data_id = self.fileListWidget.currentRow()
|
||||
|
||||
# self.spinbox_depth_min_bathy.setValue(stg.depth_cross_section[self.fileListWidget.currentRow()][0, 0])
|
||||
if stg.depth_cross_section[data_id].shape != (0,):
|
||||
self.lineEdit_depth_min_bathy.setText(
|
||||
"-" + str("%.5s" % stg.depth_cross_section[self.fileListWidget.currentRow()][0, -1]))
|
||||
# self.spinbox_depth_max_bathy.setValue(stg.depth_cross_section[self.fileListWidget.currentRow()][0, -1])
|
||||
"-" + str("%.5s" % stg.depth_cross_section[data_id][0, -1])
|
||||
)
|
||||
self.lineEdit_depth_max_bathy.setText(
|
||||
"-" + str("%.5s" % stg.depth_cross_section[self.fileListWidget.currentRow()][0, 0]))
|
||||
|
||||
"-" + str("%.5s" % stg.depth_cross_section[data_id][0, 0])
|
||||
)
|
||||
else:
|
||||
|
||||
self.lineEdit_depth_min_bathy.setText(
|
||||
"-" + str("%.5s" % stg.depth[self.fileListWidget.currentRow()][0, -1]))
|
||||
"-" + str("%.5s" % stg.depth[data_id][0, -1])
|
||||
)
|
||||
self.lineEdit_depth_max_bathy.setText(
|
||||
"-" + str("%.5s" % stg.depth[self.fileListWidget.currentRow()][0, 0]))
|
||||
"-" + str("%.5s" % stg.depth[data_id][0, 0])
|
||||
)
|
||||
|
||||
def plot_backscattered_acoustic_signal_recording(self):
|
||||
if self.fileListWidget.count() <= 0:
|
||||
|
|
@ -2466,7 +2600,7 @@ class AcousticDataTab(QWidget):
|
|||
msgBox.exec()
|
||||
return
|
||||
|
||||
data_id = self.fileListWidget.currentRow()
|
||||
data_id = max(0, self.fileListWidget.currentRow())
|
||||
|
||||
if data_id == -1:
|
||||
return
|
||||
|
|
@ -2756,8 +2890,6 @@ class AcousticDataTab(QWidget):
|
|||
float(self.lineEdit_slider.text().replace(",", ".")))))[0][0]))
|
||||
|
||||
def update_lineEdit_by_moving_slider(self):
|
||||
print("min ", np.nanmin(stg.time[self.fileListWidget.currentRow()][self.combobox_frequency_profile.currentIndex()]))
|
||||
print("max ", np.nanmax(stg.time[self.fileListWidget.currentRow()][self.combobox_frequency_profile.currentIndex()]))
|
||||
if stg.time_cross_section[self.fileListWidget.currentRow()].shape != (0,):
|
||||
self.lineEdit_slider.setText(
|
||||
str(stg.time_cross_section[self.fileListWidget.currentRow()][self.combobox_frequency_profile.currentIndex(), self.slider.value()-1]))
|
||||
|
|
@ -2815,7 +2947,7 @@ class AcousticDataTab(QWidget):
|
|||
self.detect_bottom_compute()
|
||||
|
||||
def detect_bottom_compute(self):
|
||||
data_id = self.fileListWidget.currentRow()
|
||||
data_id = max(0, self.fileListWidget.currentRow())
|
||||
freq_id = self.combobox_frequency_bathymetry.currentIndex()
|
||||
freq_text = self.combobox_frequency_bathymetry.currentText()
|
||||
|
||||
|
|
@ -2950,7 +3082,7 @@ class AcousticDataTab(QWidget):
|
|||
def detect_bottom_compute_plot_BS_with_bathymetry(
|
||||
self, BS_data, time_data, depth_data
|
||||
):
|
||||
data_id = self.fileListWidget.currentRow()
|
||||
data_id = max(0, self.fileListWidget.currentRow())
|
||||
freq_id = self.combobox_frequency_bathymetry.currentIndex()
|
||||
|
||||
for f, _ in enumerate(stg.freq[data_id]):
|
||||
|
|
|
|||
Loading…
Reference in New Issue