The sediment calibration tab is added to the software AcouSed. It includes selection of frequency, fine and sand sediments, linear interpolation of the profile of fine sediments concentration, computation of parameter ks, sv, X, alphaS and zeta.
brahim
parent
a25bc7392d
commit
fe52e097e7
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@ -51,7 +51,7 @@ class AcousticInversionMethodHighConcentration():
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min_demodul = 1e-6
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min_demodul = 1e-6
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max_demodul = 500e-6
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max_demodul = 500e-6
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sample_demodul = demodul_granulo(r_grain, frac_vol_cumul[num_sample, :], min_demodul, max_demodul)
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sample_demodul = demodul_granulo(r_grain, frac_vol_cumul[num_sample], min_demodul, max_demodul)
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resampled_log_array = np.log(np.logspace(-10, -2, 3000))
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resampled_log_array = np.log(np.logspace(-10, -2, 3000))
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proba_vol_demodul = mix_gaussian_model(resampled_log_array,
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proba_vol_demodul = mix_gaussian_model(resampled_log_array,
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@ -64,9 +64,9 @@ class AcousticInversionMethodHighConcentration():
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# sample_demodul.plot_interpolation()
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# sample_demodul.plot_interpolation()
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# sample_demodul.plot_modes(N_modes)
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# sample_demodul.plot_modes(N_modes)
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print(f"mu_list : {sample_demodul.demodul_data_list[3 - 1].mu_list}")
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# print(f"mu_list : {sample_demodul.demodul_data_list[3 - 1].mu_list}")
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print(f"sigma_list : {sample_demodul.demodul_data_list[3 - 1].sigma_list}")
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# print(f"sigma_list : {sample_demodul.demodul_data_list[3 - 1].sigma_list}")
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print(f"w_list : {sample_demodul.demodul_data_list[3 - 1].w_list}")
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# print(f"w_list : {sample_demodul.demodul_data_list[3 - 1].w_list}")
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proba_vol_demodul = proba_vol_demodul / np.sum(proba_vol_demodul)
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proba_vol_demodul = proba_vol_demodul / np.sum(proba_vol_demodul)
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ss = np.sum(proba_vol_demodul / np.exp(resampled_log_array) ** 3)
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ss = np.sum(proba_vol_demodul / np.exp(resampled_log_array) ** 3)
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@ -75,7 +75,7 @@ class AcousticInversionMethodHighConcentration():
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return proba_num
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return proba_num
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# ------------- Computing ks ------------- #
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# ------------- Computing ks ------------- #
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def form_factor_function_MoateThorne2012(self, a, freq, C=1500):
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def form_factor_function_MoateThorne2012(self, a, freq, C):
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"""This function computes the form factor based on the equation of
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"""This function computes the form factor based on the equation of
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Moate and Thorne (2012)"""
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Moate and Thorne (2012)"""
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# computing the wave number
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# computing the wave number
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@ -86,18 +86,19 @@ class AcousticInversionMethodHighConcentration():
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# print(f"form factor = {f}")
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# print(f"form factor = {f}")
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return f
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return f
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def ks(self, num_sample, freq, pdf):
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# def ks(self, num_sample_sand, radius_grain_sand, frac_vol_sand_cumul, freq, C):
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def ks(self, proba_num, freq, C):
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# --- Calcul de la fonction de form ---
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# --- Calcul de la fonction de form ---
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# form_factor = self.form_factor_function_MoateThorne2012(a, freq)
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# form_factor = self.form_factor_function_MoateThorne2012(a, freq)
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# print(f"form_factor shape = {form_factor}")
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# print(f"form_factor shape = {form_factor}")
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# print(f"form_factor = {form_factor}")
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# print(f"form_factor = {form_factor}")
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#--- Particle size distribution ---
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#--- Particle size distribution ---
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proba_num = (
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# proba_num = (
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self.compute_particle_size_distribution_in_number_of_particles(
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# self.compute_particle_size_distribution_in_number_of_particles(
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num_sample=num_sample, r_grain=stg.radius_grain, frac_vol_cumul=stg.frac_vol_sand_cumul))
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# num_sample=num_sample_sand, r_grain=radius_grain_sand, frac_vol_cumul=frac_vol_sand_cumul[num_sample_sand]))
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print(f"proba_num : {proba_num}")
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# print(f"proba_num : {proba_num}")
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# --- Compute k_s by dividing two integrals ---
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# --- Compute k_s by dividing two integrals ---
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resampled_log_array = np.log(np.logspace(-10, -2, 3000))
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resampled_log_array = np.log(np.logspace(-10, -2, 3000))
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@ -105,11 +106,12 @@ class AcousticInversionMethodHighConcentration():
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a3pdf = 0
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a3pdf = 0
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for i in range(len(resampled_log_array)):
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for i in range(len(resampled_log_array)):
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a = np.exp(resampled_log_array)[i]
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a = np.exp(resampled_log_array)[i]
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a2f2pdf += a**2 * self.form_factor_function_MoateThorne2012(a, freq)**2 * proba_num[i]
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a2f2pdf += a**2 * self.form_factor_function_MoateThorne2012(a, freq, C)**2 * proba_num[i]
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a3pdf += a**3 * proba_num[i]
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a3pdf += a**3 * proba_num[i]
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print(f"a2f2pdf = {a2f2pdf}")
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# print("form factor ", self.form_factor_function_MoateThorne2012(a, freq, C))
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print(f"a3pdf = {a3pdf}")
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# print(f"a2f2pdf = {a2f2pdf}")
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# print(f"a3pdf = {a3pdf}")
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ks = np.sqrt(a2f2pdf / a3pdf)
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ks = np.sqrt(a2f2pdf / a3pdf)
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@ -176,8 +178,8 @@ class AcousticInversionMethodHighConcentration():
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# print("BS min : ", np.nanmin(BS))
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# print("BS min : ", np.nanmin(BS))
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# print("BS max : ", np.nanmax(BS))
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# print("BS max : ", np.nanmax(BS))
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# print("r2D : ", r2D)
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# print("r2D : ", r2D)
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print("kt shape : ", kt.shape)
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# print("kt shape : ", kt.shape)
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print("kt : ", kt)
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# print("kt : ", kt)
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# print("--------------------------------")
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# print("--------------------------------")
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# for k in range(1):
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# for k in range(1):
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# J_cross_section[k, :, :] = (3 / (16 * np.pi)) * ((BS[k, :, :]**2 * r2D[k, :, :]**2) / kt[k, :, :]**2)
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# J_cross_section[k, :, :] = (3 / (16 * np.pi)) * ((BS[k, :, :]**2 * r2D[k, :, :]**2) / kt[k, :, :]**2)
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@ -247,12 +249,13 @@ class AcousticInversionMethodHighConcentration():
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while np.isnan(res[i]):
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while np.isnan(res[i]):
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res[i] = M_profile[-1]
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res[i] = M_profile[-1]
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i += -1
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i += -1
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# print(f"res.shape = {res.shape}")
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if stg.r_bottom.size != 0:
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res[np.where(range_cells > r_bottom)] = np.nan
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# print(f"2. res.shape = {res.shape}")
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# print(f"res = {res}")
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# print(f"res = {res}")
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# print(f"r_bottom.shape = {r_bottom.shape}")
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# print(f" = {res}")
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if r_bottom.shape != (0,):
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res[np.where(range_cells > r_bottom)] = np.nan
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loc_point_lin_interp0 = range_cells[np.where((range_cells > sample_depth[0]) & (range_cells < sample_depth[-1]))]
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loc_point_lin_interp0 = range_cells[np.where((range_cells > sample_depth[0]) & (range_cells < sample_depth[-1]))]
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# print(f"range_cells : {range_cells}")
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# print(f"range_cells : {range_cells}")
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@ -276,9 +279,9 @@ class AcousticInversionMethodHighConcentration():
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def zeta(self, alpha_s, r, M_profile_fine):
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def zeta(self, alpha_s, r, M_profile_fine):
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delta_r = r[1] - r[0]
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delta_r = r[1] - r[0]
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zeta = alpha_s / (np.sum(M_profile_fine*delta_r))
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zeta = alpha_s / (np.sum(np.array(M_profile_fine)*delta_r))
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print(f"np.sum(M_profile_fine*delta_r) : {np.sum(M_profile_fine*delta_r)}")
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# print(f"np.sum(M_profile_fine*delta_r) : {np.sum(M_profile_fine*delta_r)}")
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# zeta0 = np.array([0.021, 0.035, 0.057, 0.229])
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# zeta0 = np.array([0.021, 0.035, 0.057, 0.229])
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# zeta = zeta0[ind]
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# zeta = zeta0[ind]
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# zeta0 = np.array([0.04341525, 0.04832906, 0.0847188, np.nan])
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# zeta0 = np.array([0.04341525, 0.04832906, 0.0847188, np.nan])
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@ -16,7 +16,7 @@ class GranuloLoader:
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self._y = self._data.iloc[:, 1].tolist() # distance from left bank (m)
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self._y = self._data.iloc[:, 1].tolist() # distance from left bank (m)
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self._z = self._data.iloc[:, 2].tolist() # depth (m)
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self._z = self._data.iloc[:, 2].tolist() # depth (m)
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self._r_grain = 1e-6 * self._data.columns.values[5:] / 2
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self._r_grain = 1e-6 * np.array(self._data.columns.values)[5:].astype(float) / 2
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# self._r_grain = 1e-6 * np.array(self._data.columns.values)[5:].astype(float) / 2 # grain radius (m)
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# self._r_grain = 1e-6 * np.array(self._data.columns.values)[5:].astype(float) / 2 # grain radius (m)
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self._Ctot = self._data.iloc[:, 3].tolist() # Total concentration (g/L)
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self._Ctot = self._data.iloc[:, 3].tolist() # Total concentration (g/L)
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@ -54,6 +54,8 @@ class SedimentCalibrationTab(QWidget):
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# ++++++++++++++++++++++++++++++
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# ++++++++++++++++++++++++++++++
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# +++ Groupbox acoustic data +++
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# +++ Groupbox acoustic data +++
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self.groupbox_acoustic_data.setTitle("Step 1 : acoustic and sample data choice")
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self.verticalLayout_groupbox_acoustic_data = QVBoxLayout(self.groupbox_acoustic_data)
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self.verticalLayout_groupbox_acoustic_data = QVBoxLayout(self.groupbox_acoustic_data)
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# self.horizontalLayout_acoustic_data_choice = QHBoxLayout()
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# self.horizontalLayout_acoustic_data_choice = QHBoxLayout()
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@ -111,8 +113,14 @@ class SedimentCalibrationTab(QWidget):
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# +++++++++++++++++++++++++++++++++++++++++++
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# +++++++++++++++++++++++++++++++++++++++++++
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# +++ Groupbox Fine concentration profile +++
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# +++ Groupbox Fine concentration profile +++
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self.groupbox_Mfine_profile.setTitle("Step 2 : profile of the fine sediment concentration")
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self.verticalLayout_groupbox_Mfine_profile = QVBoxLayout(self.groupbox_Mfine_profile)
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self.verticalLayout_groupbox_Mfine_profile = QVBoxLayout(self.groupbox_Mfine_profile)
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self.pushbutton_interpolate_Mfine_profile = QPushButton()
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self.pushbutton_interpolate_Mfine_profile.setText("Interpolate")
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self.verticalLayout_groupbox_Mfine_profile.addWidget(self.pushbutton_interpolate_Mfine_profile)
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self.canvas_Mfine = FigureCanvas()
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self.canvas_Mfine = FigureCanvas()
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self.toolbar_Mfine = NavigationToolBar(self.canvas_Mfine, self)
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self.toolbar_Mfine = NavigationToolBar(self.canvas_Mfine, self)
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@ -130,6 +138,8 @@ class SedimentCalibrationTab(QWidget):
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# ++++++++++++++++++++
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# ++++++++++++++++++++
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# +++ Groupbox FCB +++
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# +++ Groupbox FCB +++
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self.groupbox_FCB.setTitle("Step 3 : Fluid Corrected Backscatter")
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self.verticalLayout_groupbox_FCB = QVBoxLayout(self.groupbox_FCB)
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self.verticalLayout_groupbox_FCB = QVBoxLayout(self.groupbox_FCB)
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self.canvas_FCB = FigureCanvas()
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self.canvas_FCB = FigureCanvas()
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@ -141,35 +151,83 @@ class SedimentCalibrationTab(QWidget):
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# +++++++++++++++++++++++++++++++++++++
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# +++++++++++++++++++++++++++++++++++++
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# +++ Groupbox sediment calibration +++
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# +++ Groupbox sediment calibration +++
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self.groupbox_sediment_calibration.setTitle("Sediment calibration")
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self.groupbox_sediment_calibration.setTitle("Step 4 : Compute Calibration")
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self.gridLayout_groupbox_sediment_calibration = QGridLayout(self.groupbox_sediment_calibration)
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self.gridLayout_groupbox_sediment_calibration = QGridLayout(self.groupbox_sediment_calibration)
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self.label_freq1 = QLabel("freq1")
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self.pushbutton_compute_calibration = QPushButton()
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self.gridLayout_groupbox_sediment_calibration.addWidget(self.label_freq1, 0, 1, 1, 1)
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self.pushbutton_compute_calibration.setText("Compute Calibration")
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self.gridLayout_groupbox_sediment_calibration.addWidget(self.pushbutton_compute_calibration, 0, 0, 1, 1)
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self.label_freq2 = QLabel("freq2")
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self.label_freq1 = QLabel("Frequency 1")
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self.gridLayout_groupbox_sediment_calibration.addWidget(self.label_freq2, 0, 2, 1, 1)
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self.gridLayout_groupbox_sediment_calibration.addWidget(self.label_freq1, 1, 1, 1, 1)
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self.label_freq2 = QLabel("Frequency 2")
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self.gridLayout_groupbox_sediment_calibration.addWidget(self.label_freq2, 1, 2, 1, 1)
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self.label_ks = QLabel()
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self.label_ks = QLabel()
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self.label_ks.setText("ks")
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self.label_ks.setText("ks")
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self.gridLayout_groupbox_sediment_calibration.addWidget(self.label_ks, 1, 0, 1, 1)
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self.gridLayout_groupbox_sediment_calibration.addWidget(self.label_ks, 2, 0, 1, 1)
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self.spinbox_ks_freq1 = QDoubleSpinBox()
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self.spinbox_ks_freq1.setDecimals(8)
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self.spinbox_ks_freq1.setSuffix(" m/kg^0.5")
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self.gridLayout_groupbox_sediment_calibration.addWidget(self.spinbox_ks_freq1, 2, 1, 1, 1)
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self.spinbox_ks_freq2 = QDoubleSpinBox()
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self.spinbox_ks_freq2.setDecimals(8)
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self.spinbox_ks_freq2.setSuffix(" m/kg^0.5")
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self.gridLayout_groupbox_sediment_calibration.addWidget(self.spinbox_ks_freq2, 2, 2, 1, 1)
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self.label_sv = QLabel()
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self.label_sv = QLabel()
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self.label_sv.setText("sv")
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self.label_sv.setText("sv")
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self.gridLayout_groupbox_sediment_calibration.addWidget(self.label_sv, 2, 0, 1, 1)
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self.gridLayout_groupbox_sediment_calibration.addWidget(self.label_sv, 3, 0, 1, 1)
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self.spinbox_sv_freq1 = QDoubleSpinBox()
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self.spinbox_sv_freq1.setDecimals(8)
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self.spinbox_sv_freq1.setSuffix(" /m")
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self.gridLayout_groupbox_sediment_calibration.addWidget(self.spinbox_sv_freq1, 3, 1, 1, 1)
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self.spinbox_sv_freq2 = QDoubleSpinBox()
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self.spinbox_sv_freq2.setDecimals(8)
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self.spinbox_sv_freq2.setSuffix(" /m")
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self.gridLayout_groupbox_sediment_calibration.addWidget(self.spinbox_sv_freq2, 3, 2, 1, 1)
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self.label_X = QLabel()
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self.label_X = QLabel()
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self.label_X.setText("X")
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self.label_X.setText("X")
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self.gridLayout_groupbox_sediment_calibration.addWidget(self.label_X, 3, 0, 1, 1)
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self.gridLayout_groupbox_sediment_calibration.addWidget(self.label_X, 4, 0, 1, 1)
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self.spinbox_X = QDoubleSpinBox()
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self.spinbox_X.setDecimals(2)
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self.gridLayout_groupbox_sediment_calibration.addWidget(self.spinbox_X, 4, 1, 1, 2)
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self.label_alphas = QLabel()
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self.label_alphas = QLabel()
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self.label_alphas.setText("\u03B1s")
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self.label_alphas.setText("\u03B1s")
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self.gridLayout_groupbox_sediment_calibration.addWidget(self.label_alphas, 4, 0, 1, 1)
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self.gridLayout_groupbox_sediment_calibration.addWidget(self.label_alphas, 5, 0, 1, 1)
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self.spinbox_alphas_freq1 = QDoubleSpinBox()
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self.spinbox_alphas_freq1.setDecimals(4)
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self.spinbox_alphas_freq1.setSuffix(" /m")
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self.gridLayout_groupbox_sediment_calibration.addWidget(self.spinbox_alphas_freq1, 5, 1, 1, 1)
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self.spinbox_alphas_freq2 = QDoubleSpinBox()
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self.spinbox_alphas_freq2.setDecimals(4)
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self.spinbox_alphas_freq2.setSuffix(" /m")
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self.gridLayout_groupbox_sediment_calibration.addWidget(self.spinbox_alphas_freq2, 5, 2, 1, 1)
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self.label_zeta = QLabel()
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self.label_zeta = QLabel()
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self.label_zeta.setText("\u03B6")
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self.label_zeta.setText("\u03B6")
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self.gridLayout_groupbox_sediment_calibration.addWidget(self.label_zeta, 5, 0, 1, 1)
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self.gridLayout_groupbox_sediment_calibration.addWidget(self.label_zeta, 6, 0, 1, 1)
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self.spinbox_zeta_freq1 = QDoubleSpinBox()
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self.spinbox_zeta_freq1.setDecimals(4)
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self.spinbox_zeta_freq1.setSuffix(" /m")
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self.gridLayout_groupbox_sediment_calibration.addWidget(self.spinbox_zeta_freq1, 6, 1, 1, 1)
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self.spinbox_zeta_freq2 = QDoubleSpinBox()
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self.spinbox_zeta_freq2.setDecimals(4)
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self.spinbox_zeta_freq2.setSuffix(" /m")
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self.gridLayout_groupbox_sediment_calibration.addWidget(self.spinbox_zeta_freq2, 6, 2, 1, 1)
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# ==============================================================================================================
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# ==============================================================================================================
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||||||
# ---------------------------------------- Connect signal of widget --------------------------------------------
|
# ---------------------------------------- Connect signal of widget --------------------------------------------
|
||||||
|
|
@ -179,6 +237,10 @@ class SedimentCalibrationTab(QWidget):
|
||||||
|
|
||||||
self.pushbutton_plot_sample.clicked.connect(self.function_pushbutton_plot_sample)
|
self.pushbutton_plot_sample.clicked.connect(self.function_pushbutton_plot_sample)
|
||||||
|
|
||||||
|
self.pushbutton_interpolate_Mfine_profile.clicked.connect(self.interpolate_Mfine_profile)
|
||||||
|
|
||||||
|
self.pushbutton_compute_calibration.clicked.connect(self.function_pushbutton_compute_calibration)
|
||||||
|
|
||||||
# ==============================================================================================================
|
# ==============================================================================================================
|
||||||
# ----------------------------------- Functions for Signal processing Tab --------------------------------------
|
# ----------------------------------- Functions for Signal processing Tab --------------------------------------
|
||||||
# ==============================================================================================================
|
# ==============================================================================================================
|
||||||
|
|
@ -220,7 +282,7 @@ class SedimentCalibrationTab(QWidget):
|
||||||
self.verticalLayout_groupbox_acoustic_data.addWidget(self.canvas_BS)
|
self.verticalLayout_groupbox_acoustic_data.addWidget(self.canvas_BS)
|
||||||
|
|
||||||
if stg.BS_stream_bed[self.combobox_acoustic_data_choice.currentIndex()].shape != (0,):
|
if stg.BS_stream_bed[self.combobox_acoustic_data_choice.currentIndex()].shape != (0,):
|
||||||
|
print("totototototototoott")
|
||||||
val_min = np.nanmin(
|
val_min = np.nanmin(
|
||||||
stg.BS_stream_bed[self.combobox_acoustic_data_choice.currentIndex()][self.combobox_freq2.currentIndex(),
|
stg.BS_stream_bed[self.combobox_acoustic_data_choice.currentIndex()][self.combobox_freq2.currentIndex(),
|
||||||
:, :])
|
:, :])
|
||||||
|
|
@ -325,8 +387,101 @@ class SedimentCalibrationTab(QWidget):
|
||||||
stg.sand_sample_target = [(s, int(s[1:]) - 1) for s in self.combobox_sand_sample_choice.currentData()]
|
stg.sand_sample_target = [(s, int(s[1:]) - 1) for s in self.combobox_sand_sample_choice.currentData()]
|
||||||
print(f"stg.sand_sample_target : {stg.sand_sample_target}")
|
print(f"stg.sand_sample_target : {stg.sand_sample_target}")
|
||||||
|
|
||||||
|
# --- Find index in time (along acoustic recording) of sand sample target ---
|
||||||
|
if stg.time_cross_section[self.combobox_acoustic_data_choice.currentIndex()].shape != (0,):
|
||||||
|
t1 = (
|
||||||
|
np.where(np.abs(stg.time_cross_section[self.combobox_acoustic_data_choice.currentIndex()][
|
||||||
|
self.combobox_freq1.currentIndex()] - stg.time_sand[stg.sand_sample_target[0][1]]) ==
|
||||||
|
np.nanmin(np.abs(stg.time_cross_section[self.combobox_acoustic_data_choice.currentIndex()][
|
||||||
|
self.combobox_freq1.currentIndex()] - stg.time_sand[stg.sand_sample_target[0][1]])))[0][0]
|
||||||
|
)
|
||||||
|
t2 = (
|
||||||
|
np.where(np.abs(stg.time_cross_section[self.combobox_acoustic_data_choice.currentIndex()][
|
||||||
|
self.combobox_freq2.currentIndex()] - stg.time_sand[stg.sand_sample_target[0][1]]) ==
|
||||||
|
np.nanmin(np.abs(stg.time_cross_section[self.combobox_acoustic_data_choice.currentIndex()][
|
||||||
|
self.combobox_freq2.currentIndex()] - stg.time_sand[stg.sand_sample_target[0][1]])))[0][0]
|
||||||
|
)
|
||||||
|
else:
|
||||||
|
t1 = (
|
||||||
|
np.where(np.abs(stg.time[self.combobox_acoustic_data_choice.currentIndex()][
|
||||||
|
self.combobox_freq1.currentIndex()] - stg.time_sand[
|
||||||
|
stg.sand_sample_target[0][1]]) ==
|
||||||
|
np.nanmin(np.abs(stg.time[self.combobox_acoustic_data_choice.currentIndex()][
|
||||||
|
self.combobox_freq1.currentIndex()] - stg.time_sand[
|
||||||
|
stg.sand_sample_target[0][1]])))[0][0]
|
||||||
|
)
|
||||||
|
t2 = (
|
||||||
|
np.where(np.abs(stg.time[self.combobox_acoustic_data_choice.currentIndex()][
|
||||||
|
self.combobox_freq2.currentIndex()] - stg.time_sand[
|
||||||
|
stg.sand_sample_target[0][1]]) ==
|
||||||
|
np.nanmin(np.abs(stg.time[self.combobox_acoustic_data_choice.currentIndex()][
|
||||||
|
self.combobox_freq2.currentIndex()] - stg.time_sand[
|
||||||
|
stg.sand_sample_target[0][1]])))[0][0]
|
||||||
|
)
|
||||||
|
|
||||||
|
# --- Find index in depth (along acoustic recording) of sand sample target ---
|
||||||
|
if stg.depth_cross_section[self.combobox_acoustic_data_choice.currentIndex()].shape != (0,):
|
||||||
|
d1 = (
|
||||||
|
np.where(np.abs(stg.depth_cross_section[self.combobox_acoustic_data_choice.currentIndex()][
|
||||||
|
self.combobox_freq1.currentIndex()] - (-stg.depth_sand[stg.sand_sample_target[0][1]]) ) ==
|
||||||
|
np.nanmin(np.abs(stg.depth_cross_section[self.combobox_acoustic_data_choice.currentIndex()][
|
||||||
|
self.combobox_freq1.currentIndex()] - (-stg.depth_sand[stg.sand_sample_target[0][1]]) )))[0][0]
|
||||||
|
)
|
||||||
|
d2 = (
|
||||||
|
np.where(np.abs(stg.depth_cross_section[self.combobox_acoustic_data_choice.currentIndex()][
|
||||||
|
self.combobox_freq2.currentIndex()] - (-stg.depth_sand[stg.sand_sample_target[0][1]]) ) ==
|
||||||
|
np.nanmin(np.abs(stg.depth_cross_section[self.combobox_acoustic_data_choice.currentIndex()][
|
||||||
|
self.combobox_freq2.currentIndex()] - (-stg.depth_sand[stg.sand_sample_target[0][1]]) )))[0][0]
|
||||||
|
)
|
||||||
|
else:
|
||||||
|
d1 = (
|
||||||
|
np.where(np.abs(stg.depth[self.combobox_acoustic_data_choice.currentIndex()][
|
||||||
|
self.combobox_freq1.currentIndex()] - (-stg.depth_sand[
|
||||||
|
stg.sand_sample_target[0][1]]) ) ==
|
||||||
|
np.nanmin(np.abs(stg.depth[self.combobox_acoustic_data_choice.currentIndex()][
|
||||||
|
self.combobox_freq1.currentIndex()] - (-stg.depth_sand[
|
||||||
|
stg.sand_sample_target[0][1]]) )))[0][0]
|
||||||
|
)
|
||||||
|
d2 = (
|
||||||
|
np.where(np.abs(stg.depth[self.combobox_acoustic_data_choice.currentIndex()][
|
||||||
|
self.combobox_freq2.currentIndex()] - (-stg.depth_sand[
|
||||||
|
stg.sand_sample_target[0][1]]) ) ==
|
||||||
|
np.nanmin(np.abs(stg.depth[self.combobox_acoustic_data_choice.currentIndex()][
|
||||||
|
self.combobox_freq2.currentIndex()] - (-stg.depth_sand[
|
||||||
|
stg.sand_sample_target[0][1]]) )))[0][0]
|
||||||
|
)
|
||||||
|
|
||||||
|
stg.sand_sample_target_indice = [(d1, t1), (d2, t2)]
|
||||||
|
print("stg.sand_sample_target_indice ", stg.sand_sample_target_indice)
|
||||||
|
|
||||||
def plot_profile_of_concentration_fine(self):
|
def plot_profile_of_concentration_fine(self):
|
||||||
|
|
||||||
|
# --- Plot profile of the concentration of the fine sediments ---
|
||||||
|
self.verticalLayout_groupbox_Mfine_profile.removeWidget(self.canvas_Mfine)
|
||||||
|
self.verticalLayout_groupbox_Mfine_profile.removeWidget(self.toolbar_Mfine)
|
||||||
|
self.fig_Mfine, self.ax_Mfine = plt.subplots(1, 1, layout="constrained")
|
||||||
|
self.canvas_Mfine = FigureCanvas(self.fig_Mfine)
|
||||||
|
self.toolbar_Mfine = NavigationToolBar(self.canvas_Mfine, self)
|
||||||
|
self.verticalLayout_groupbox_Mfine_profile.addWidget(self.toolbar_Mfine)
|
||||||
|
self.verticalLayout_groupbox_Mfine_profile.addWidget(self.canvas_Mfine)
|
||||||
|
|
||||||
|
for t, c in stg.fine_sample_profile:
|
||||||
|
|
||||||
|
self.ax_Mfine.plot(stg.Ctot_fine[c], stg.depth_fine[c],
|
||||||
|
marker="o", mfc="k", mec="k", ms=10, ls="None")
|
||||||
|
|
||||||
|
self.ax_Mfine.text(stg.Ctot_fine[c] + 0.05 * stg.Ctot_fine[c], stg.depth_fine[c], t,
|
||||||
|
fontstyle="normal", fontweight="light", fontsize=12)
|
||||||
|
|
||||||
|
self.ax_Mfine.set_xlabel("Concentration fine sediments (g/L)")
|
||||||
|
self.ax_Mfine.set_ylabel("Depth (m)")
|
||||||
|
|
||||||
|
if stg.M_profile_fine:
|
||||||
|
self.ax_Mfine.plot(stg.M_profile_fine, [-r for r in stg.range_lin_interp],
|
||||||
|
marker="*", mfc="b", mec="b", ms=8, ls="None")
|
||||||
|
|
||||||
|
def interpolate_Mfine_profile(self):
|
||||||
|
|
||||||
if stg.depth_cross_section[self.combobox_acoustic_data_choice.currentIndex()].shape != (0,):
|
if stg.depth_cross_section[self.combobox_acoustic_data_choice.currentIndex()].shape != (0,):
|
||||||
|
|
||||||
print("test find indice of time ", np.where( np.abs(stg.time_cross_section[self.combobox_acoustic_data_choice.currentIndex()][self.combobox_freq2.currentIndex(), :]
|
print("test find indice of time ", np.where( np.abs(stg.time_cross_section[self.combobox_acoustic_data_choice.currentIndex()][self.combobox_freq2.currentIndex(), :]
|
||||||
|
|
@ -336,7 +491,7 @@ class SedimentCalibrationTab(QWidget):
|
||||||
print(stg.time_cross_section[self.combobox_acoustic_data_choice.currentIndex()][self.combobox_freq2.currentIndex(), :])
|
print(stg.time_cross_section[self.combobox_acoustic_data_choice.currentIndex()][self.combobox_freq2.currentIndex(), :])
|
||||||
print(stg.time_fine[stg.fine_sample_profile[-1][1]])
|
print(stg.time_fine[stg.fine_sample_profile[-1][1]])
|
||||||
|
|
||||||
range_lin_interp, M_profile_fine = (
|
stg.range_lin_interp, stg.M_profile_fine = (
|
||||||
self.inv_hc.M_profile_SCC_fine_interpolated(
|
self.inv_hc.M_profile_SCC_fine_interpolated(
|
||||||
sample_depth=[-stg.depth_fine[k[1]] for k in stg.fine_sample_profile],
|
sample_depth=[-stg.depth_fine[k[1]] for k in stg.fine_sample_profile],
|
||||||
M_profile=[stg.Ctot_fine[k[1]] for k in stg.fine_sample_profile],
|
M_profile=[stg.Ctot_fine[k[1]] for k in stg.fine_sample_profile],
|
||||||
|
|
@ -353,80 +508,58 @@ class SedimentCalibrationTab(QWidget):
|
||||||
# print(f"range_lin_interp : {range_lin_interp}")
|
# print(f"range_lin_interp : {range_lin_interp}")
|
||||||
# print(f"M_profile_fine : {M_profile_fine}")
|
# print(f"M_profile_fine : {M_profile_fine}")
|
||||||
else:
|
else:
|
||||||
range_lin_interp, M_profile_fine = (
|
stg.range_lin_interp, stg.M_profile_fine = (
|
||||||
self.inv_hc.M_profile_SCC_fine_interpolated(
|
self.inv_hc.M_profile_SCC_fine_interpolated(
|
||||||
sample_depth=[-stg.depth_fine[k[1]] for k in stg.fine_sample_profile],
|
sample_depth=[-stg.depth_fine[k[1]] for k in stg.fine_sample_profile],
|
||||||
M_profile=[stg.Ctot_fine[k[1]] for k in stg.fine_sample_profile],
|
M_profile=[stg.Ctot_fine[k[1]] for k in stg.fine_sample_profile],
|
||||||
range_cells=stg.depth[self.combobox_acoustic_data_choice.currentIndex()][self.combobox_freq2.currentIndex(), :],
|
range_cells=stg.depth[self.combobox_acoustic_data_choice.currentIndex()][self.combobox_freq2.currentIndex(), :],
|
||||||
r_bottom=stg.depth_bottom[self.combobox_acoustic_data_choice.currentIndex()]))
|
r_bottom=stg.depth_bottom[self.combobox_acoustic_data_choice.currentIndex()]))
|
||||||
|
print(f"1 M_profile_fine : {stg.M_profile_fine}")
|
||||||
|
stg.range_lin_interp = stg.range_lin_interp.tolist()
|
||||||
|
stg.M_profile_fine = stg.M_profile_fine.tolist()
|
||||||
|
stg.M_profile_fine = stg.M_profile_fine[:len(stg.range_lin_interp)]
|
||||||
|
print(f"2 M_profile_fine : {stg.M_profile_fine}")
|
||||||
|
|
||||||
M_profile_fine = M_profile_fine[:len(range_lin_interp)]
|
self.plot_profile_of_concentration_fine()
|
||||||
print(f"M_profile_fine : {M_profile_fine}")
|
|
||||||
|
|
||||||
# --- Plot profile of the concentration of the fine sediments ---
|
# def range_cells_function(self):
|
||||||
self.verticalLayout_groupbox_Mfine_profile.removeWidget(self.canvas_Mfine)
|
# """ Computing the real cell size, that depends on the temperature """
|
||||||
self.verticalLayout_groupbox_Mfine_profile.removeWidget(self.toolbar_Mfine)
|
#
|
||||||
self.fig_Mfine, self.ax_Mfine = plt.subplots(1, 1, layout="constrained")
|
# # defaut Aquascat cell size
|
||||||
self.canvas_Mfine = FigureCanvas(self.fig_Mfine)
|
# aquascat_cell_size = stg.r[0, 1] - stg.r[0, 0]
|
||||||
self.toolbar_Mfine = NavigationToolBar(self.canvas_Mfine, self)
|
# # Pulse duration
|
||||||
self.verticalLayout_groupbox_Mfine_profile.addWidget(self.toolbar_Mfine)
|
# tau = aquascat_cell_size * 2 / 1500 # figure 2.9 1500 vitesse du son entrée pour le paramètrage des mesures aquascat
|
||||||
self.verticalLayout_groupbox_Mfine_profile.addWidget(self.canvas_Mfine)
|
# # Sound speed
|
||||||
|
# cel = self.inv_hc.water_velocity(self.spinbox_temperature_water_attenuation.value())
|
||||||
self.ax_Mfine.plot([stg.Ctot_fine[c] for _, c in stg.fine_sample_profile],
|
# # Real cell size
|
||||||
[stg.depth_fine[c] for _, c in stg.fine_sample_profile],
|
# real_cell_size = cel * tau / 2 # voir fig 2.9
|
||||||
marker="o", mfc="k", mec="k", ms=12, ls="None")
|
#
|
||||||
|
# # Converting to real cell profile
|
||||||
self.ax_Mfine.plot(M_profile_fine[:len(range_lin_interp)], -range_lin_interp,
|
# real_r = stg.r / aquascat_cell_size * real_cell_size # (/ aquascat_cell_size) pour ramener BS.r entre 0 et 1
|
||||||
marker="*", mfc="b", mec="b", ms=8, ls="None")
|
# # (* real_cell_size) pour remettre les échelles spatiales sur la taille réelle des cellules
|
||||||
|
#
|
||||||
self.ax_Mfine.set_xlabel("Concentration fine sediments (g/L)")
|
# # R with right shape (numpy array)
|
||||||
self.ax_Mfine.set_ylabel("Depth (m)")
|
# R_real = real_r # np.repeat(real_r, len(stg.freq), axis=1)
|
||||||
|
#
|
||||||
for i in stg.fine_sample_profile:
|
# return R_real
|
||||||
self.ax_Mfine.text(stg.time_fine[i[1]], stg.depth_fine[i[1]] - .05, i[0],
|
|
||||||
fontstyle="normal", fontweight="light", fontsize=12)
|
|
||||||
|
|
||||||
self.ax_Mfine.set_xlabel("Fine sediments concentration (g/L)")
|
|
||||||
self.ax_Mfine.set_ylabel("Depth (m)")
|
|
||||||
|
|
||||||
def range_cells_function(self):
|
|
||||||
""" Computing the real cell size, that depends on the temperature """
|
|
||||||
|
|
||||||
# defaut Aquascat cell size
|
|
||||||
aquascat_cell_size = stg.r[0, 1] - stg.r[0, 0]
|
|
||||||
# Pulse duration
|
|
||||||
tau = aquascat_cell_size * 2 / 1500 # figure 2.9 1500 vitesse du son entrée pour le paramètrage des mesures aquascat
|
|
||||||
# Sound speed
|
|
||||||
cel = self.inv_hc.water_velocity(self.spinbox_temperature_water_attenuation.value())
|
|
||||||
# Real cell size
|
|
||||||
real_cell_size = cel * tau / 2 # voir fig 2.9
|
|
||||||
|
|
||||||
# Converting to real cell profile
|
|
||||||
real_r = stg.r / aquascat_cell_size * real_cell_size # (/ aquascat_cell_size) pour ramener BS.r entre 0 et 1
|
|
||||||
# (* real_cell_size) pour remettre les échelles spatiales sur la taille réelle des cellules
|
|
||||||
|
|
||||||
# R with right shape (numpy array)
|
|
||||||
R_real = real_r # np.repeat(real_r, len(stg.freq), axis=1)
|
|
||||||
|
|
||||||
return R_real
|
|
||||||
|
|
||||||
|
|
||||||
def compute_FCB(self):
|
# def compute_FCB(self):
|
||||||
|
#
|
||||||
print(f"self.range_cells_function() : {self.range_cells_function()}")
|
# print(f"self.range_cells_function() : {self.range_cells_function()}")
|
||||||
print(f"self.range_cells_function() shape : {self.range_cells_function().shape}")
|
# print(f"self.range_cells_function() shape : {self.range_cells_function().shape}")
|
||||||
R_real = np.repeat(self.range_cells_function()[:, :, np.newaxis], stg.t.shape[1], axis=2)
|
# R_real = np.repeat(self.range_cells_function()[:, :, np.newaxis], stg.t.shape[1], axis=2)
|
||||||
print(f"R_real shape : {R_real.shape}")
|
# print(f"R_real shape : {R_real.shape}")
|
||||||
if (stg.BS_stream_bed_pre_process_average.size == 0) and (stg.BS_stream_bed_pre_process_SNR.size == 0):
|
# if (stg.BS_stream_bed_pre_process_average.size == 0) and (stg.BS_stream_bed_pre_process_SNR.size == 0):
|
||||||
stg.FCB = (np.log(stg.BS_stream_bed) + np.log(R_real) +
|
# stg.FCB = (np.log(stg.BS_stream_bed) + np.log(R_real) +
|
||||||
2 * stg.water_attenuation * R_real)
|
# 2 * stg.water_attenuation * R_real)
|
||||||
elif stg.BS_stream_bed_pre_process_SNR.size == 0:
|
# elif stg.BS_stream_bed_pre_process_SNR.size == 0:
|
||||||
stg.FCB = (np.log(stg.BS_stream_bed_pre_process_average) + np.log(R_real) +
|
# stg.FCB = (np.log(stg.BS_stream_bed_pre_process_average) + np.log(R_real) +
|
||||||
2 * stg.water_attenuation * R_real)
|
# 2 * stg.water_attenuation * R_real)
|
||||||
else:
|
# else:
|
||||||
stg.FCB = (np.log(stg.BS_stream_bed_pre_process_SNR) + np.log(R_real) +
|
# stg.FCB = (np.log(stg.BS_stream_bed_pre_process_SNR) + np.log(R_real) +
|
||||||
2 * stg.water_attenuation * R_real)
|
# 2 * stg.water_attenuation * R_real)
|
||||||
self.plot_FCB()
|
# self.plot_FCB()
|
||||||
|
|
||||||
# def fit_FCB_profile_with_linear_regression_and_compute_alphaS(self):
|
# def fit_FCB_profile_with_linear_regression_and_compute_alphaS(self):
|
||||||
#
|
#
|
||||||
|
|
@ -493,65 +626,262 @@ class SedimentCalibrationTab(QWidget):
|
||||||
# # print("lin_reg length ", len(stg.lin_reg))
|
# # print("lin_reg length ", len(stg.lin_reg))
|
||||||
# # print("lin_reg ", stg.lin_reg)
|
# # print("lin_reg ", stg.lin_reg)
|
||||||
|
|
||||||
|
# ------------------------------------------------------------------
|
||||||
|
# --------------- Functions for sediment calibration ---------------
|
||||||
|
# ------------------------------------------------------------------
|
||||||
|
def function_pushbutton_compute_calibration(self):
|
||||||
|
|
||||||
|
# --- Compute frequency ---
|
||||||
|
self.label_freq1.clear()
|
||||||
|
self.label_freq1.setText(str(self.combobox_freq1.currentText()))
|
||||||
|
|
||||||
# print([stg.time_fine[c] for _, c in stg.fine_sample_profile])
|
self.label_freq2.clear()
|
||||||
# print([stg.depth_fine[c] for _, c in stg.fine_sample_profile])
|
self.label_freq2.setText(str(self.combobox_freq2.currentText()))
|
||||||
|
|
||||||
# --- Plot positions of the samples selected in comboboxes ---
|
# --- Compute ks ---
|
||||||
# self.scat.set_array(np.array([[stg.time_fine[c] for _, c in stg.fine_sample_profile],
|
psd_number_of_particles = (
|
||||||
# [stg.depth_fine[c] for _, c in stg.fine_sample_profile]]).transpose())
|
self.inv_hc.compute_particle_size_distribution_in_number_of_particles(
|
||||||
# self.scat.set_array(np.array([[stg.time_fine[c] for _, c in stg.fine_sample_profile],
|
num_sample=stg.sand_sample_target[0][1], r_grain=stg.radius_grain_sand,
|
||||||
# [stg.depth_fine[c] for _, c in stg.fine_sample_profile]]).transpose())
|
frac_vol_cumul=stg.frac_vol_sand_cumul))
|
||||||
|
|
||||||
# self.gridLayout_groupbox_data_choice = QGridLayout(self.groupbox_acoustic_data_choice)
|
ks_freq1 = self.inv_hc.ks(proba_num=psd_number_of_particles,
|
||||||
#
|
freq=stg.freq[self.combobox_acoustic_data_choice.currentIndex()][
|
||||||
# self.gridLayout_groupbox_data_choice.addWidget(self.combobox_acoustic_data_choice, 0, 0, 1, 4)
|
self.combobox_freq1.currentIndex()],
|
||||||
# self.combobox_acoustic_data_choice.addItems(["acoustic data 1", "acoustic data 2", "acoustic data 3"])
|
C=stg.water_velocity[self.combobox_acoustic_data_choice.currentIndex()])
|
||||||
#
|
|
||||||
# self.label_temperature = QLabel("Temperature = ")
|
|
||||||
# self.gridLayout_groupbox_data_choice.addWidget(self.label_temperature, 1, 0, 1, 1)
|
|
||||||
#
|
|
||||||
# self.label_temperature_value = QLabel("7 °C")
|
|
||||||
# self.gridLayout_groupbox_data_choice.addWidget(self.label_temperature_value, 1, 1, 1, 1)
|
|
||||||
#
|
|
||||||
# self.label_sound_velocity = QLabel("Sound velocity (m/s) = ")
|
|
||||||
# self.gridLayout_groupbox_data_choice.addWidget(self.label_sound_velocity, 1, 2, 1, 1)
|
|
||||||
#
|
|
||||||
# self.spinbox_sound_velocity_value = QSpinBox()
|
|
||||||
# self.gridLayout_groupbox_data_choice.addWidget(self.spinbox_sound_velocity_value, 1, 3, 1, 1)
|
|
||||||
#
|
|
||||||
# self.label_freq1 = QLabel("freq 1:")
|
|
||||||
# self.gridLayout_groupbox_data_choice.addWidget(self.label_freq1, 2, 0, 1, 1)
|
|
||||||
# self.combobox_freq1 = QComboBox()
|
|
||||||
# self.combobox_freq1.addItems(["0.3 MHz", "0.5 MHz", "1 MHz", "5 MHz"])
|
|
||||||
# self.gridLayout_groupbox_data_choice.addWidget(self.combobox_freq1, 2, 1, 1, 1)
|
|
||||||
#
|
|
||||||
# self.label_freq2 = QLabel("freq 2:")
|
|
||||||
# self.gridLayout_groupbox_data_choice.addWidget(self.label_freq2, 2, 2, 1, 1)
|
|
||||||
# self.combobox_freq2 = QComboBox()
|
|
||||||
# self.combobox_freq2.addItems(["0.3 MHz", "0.5 MHz", "1 MHz", "5 MHz"])
|
|
||||||
# self.gridLayout_groupbox_data_choice.addWidget(self.combobox_freq2, 2, 3, 1, 1)
|
|
||||||
#
|
|
||||||
# self.label_kt = QLabel("kt = :")
|
|
||||||
# self.gridLayout_groupbox_data_choice.addWidget(self.label_kt, 3, 0, 1, 1)
|
|
||||||
#
|
|
||||||
# self.spinbox_kt_freq1 = QDoubleSpinBox()
|
|
||||||
# self.spinbox_kt_freq1.setDecimals(5)
|
|
||||||
# self.gridLayout_groupbox_data_choice.addWidget(self.spinbox_kt_freq1, 3, 1, 1, 1)
|
|
||||||
#
|
|
||||||
# self.spinbox_kt_freq2 = QDoubleSpinBox()
|
|
||||||
# self.spinbox_kt_freq2.setDecimals(5)
|
|
||||||
# self.gridLayout_groupbox_data_choice.addWidget(self.spinbox_kt_freq2, 3, 3, 1, 1)
|
|
||||||
#
|
|
||||||
# self.groupbox_acoustic_data_plot = QGroupBox()
|
|
||||||
# self.verticalLayout_groupbox_acoustic_data_plot = QVBoxLayout(self.groupbox_acoustic_data_plot)
|
|
||||||
# self.gridLayout_groupbox_data_choice.addWidget(self.groupbox_acoustic_data_plot, 4, 0, 1, 4)
|
|
||||||
#
|
|
||||||
# self.fig_acoustic, self.ax_acoustic = plt.subplots(nrows=1, ncols=1, layout="constrained")
|
|
||||||
# self.canvas_fig_acoustic = FigureCanvas(self.fig_acoustic)
|
|
||||||
# self.verticalLayout_groupbox_acoustic_data_plot.addWidget(self.canvas_fig_acoustic)
|
|
||||||
|
|
||||||
|
ks_freq2 = self.inv_hc.ks(proba_num=psd_number_of_particles,
|
||||||
|
freq=stg.freq[self.combobox_acoustic_data_choice.currentIndex()][
|
||||||
|
self.combobox_freq2.currentIndex()],
|
||||||
|
C=stg.water_velocity[self.combobox_acoustic_data_choice.currentIndex()])
|
||||||
|
|
||||||
|
print("\n************************************************************** \n")
|
||||||
|
print(f"ks for frequency of {stg.freq[self.combobox_acoustic_data_choice.currentIndex()][self.combobox_freq1.currentIndex()]} : {ks_freq1} m/kg^0.5 \n")
|
||||||
|
print(f"ks for frequency of {stg.freq[self.combobox_acoustic_data_choice.currentIndex()][self.combobox_freq2.currentIndex()]} : {ks_freq2} m/kg^0.5")
|
||||||
|
|
||||||
|
self.spinbox_ks_freq1.clear()
|
||||||
|
self.spinbox_ks_freq1.setValue(ks_freq1)
|
||||||
|
|
||||||
|
self.spinbox_ks_freq2.clear()
|
||||||
|
self.spinbox_ks_freq2.setValue(ks_freq2)
|
||||||
|
|
||||||
|
# --- Compute sv ---
|
||||||
|
sv_freq1 = self.inv_hc.sv(ks=ks_freq1, M_sand=stg.Ctot_sand[stg.sand_sample_target[0][1]])
|
||||||
|
sv_freq2 = self.inv_hc.sv(ks=ks_freq2, M_sand=stg.Ctot_sand[stg.sand_sample_target[0][1]])
|
||||||
|
|
||||||
|
print(f"sv for frequency of {stg.freq[self.combobox_acoustic_data_choice.currentIndex()][self.combobox_freq1.currentIndex()]} : {sv_freq1:.8f} /m \n")
|
||||||
|
print(f"sv for frequency of {stg.freq[self.combobox_acoustic_data_choice.currentIndex()][self.combobox_freq2.currentIndex()]} : {sv_freq2:.8f} /m")
|
||||||
|
|
||||||
|
self.spinbox_sv_freq1.clear()
|
||||||
|
self.spinbox_sv_freq1.setValue(sv_freq1)
|
||||||
|
|
||||||
|
self.spinbox_sv_freq2.clear()
|
||||||
|
self.spinbox_sv_freq2.setValue(sv_freq2)
|
||||||
|
|
||||||
|
# --- Compute exponent X ---
|
||||||
|
X_exponent = self.inv_hc.X_exponent(freq1=stg.freq[self.combobox_acoustic_data_choice.currentIndex()][self.combobox_freq1.currentIndex()],
|
||||||
|
freq2=stg.freq[self.combobox_acoustic_data_choice.currentIndex()][self.combobox_freq2.currentIndex()],
|
||||||
|
sv_freq1=sv_freq1, sv_freq2=sv_freq2)
|
||||||
|
|
||||||
|
print(f"Exponent X = {X_exponent:.2f}\n")
|
||||||
|
|
||||||
|
self.spinbox_X.clear()
|
||||||
|
self.spinbox_X.setValue(X_exponent)
|
||||||
|
|
||||||
|
# --- Compute J ---
|
||||||
|
if stg.BS_stream_bed[self.combobox_acoustic_data_choice.currentIndex()].shape != (0,):
|
||||||
|
|
||||||
|
depth_2D = np.zeros(stg.BS_stream_bed[self.combobox_acoustic_data_choice.currentIndex()].shape)
|
||||||
|
for f, _ in enumerate(stg.freq[self.combobox_acoustic_data_choice.currentIndex()]):
|
||||||
|
depth_2D[f, :, :] = np.repeat(np.transpose(stg.depth_cross_section[self.combobox_acoustic_data_choice.currentIndex()]
|
||||||
|
[self.combobox_freq1.currentIndex()])[:, np.newaxis],
|
||||||
|
stg.time_cross_section[self.combobox_acoustic_data_choice.currentIndex()].shape[1],
|
||||||
|
axis=1)
|
||||||
|
|
||||||
|
print("kt cor ", stg.kt_corrected)
|
||||||
|
print("kt read", stg.kt_read)
|
||||||
|
|
||||||
|
if (stg.kt_corrected[self.combobox_acoustic_data_choice.currentIndex()] !=
|
||||||
|
stg.kt_read[self.combobox_acoustic_data_choice.currentIndex()]):
|
||||||
|
kt2D = np.repeat(np.array([stg.kt_corrected[self.combobox_acoustic_data_choice.currentIndex()]]).transpose(),
|
||||||
|
stg.time_cross_section[self.combobox_acoustic_data_choice.currentIndex()].shape[1],
|
||||||
|
axis=1)
|
||||||
|
kt3D = np.repeat(kt2D[:, np.newaxis, :],
|
||||||
|
stg.depth_cross_section[self.combobox_acoustic_data_choice.currentIndex()].shape[1], axis=1)
|
||||||
|
else:
|
||||||
|
kt2D = np.repeat(np.array([stg.kt_read[self.combobox_acoustic_data_choice.currentIndex()]]).transpose(),
|
||||||
|
stg.time_cross_section[self.combobox_acoustic_data_choice.currentIndex()].shape[1],
|
||||||
|
axis=1)
|
||||||
|
print(stg.depth_cross_section[self.combobox_acoustic_data_choice.currentIndex()].shape)
|
||||||
|
print("kt2D shape ", kt2D.shape)
|
||||||
|
print("kt2D ", kt2D)
|
||||||
|
kt3D = np.repeat(kt2D[:, np.newaxis, :],
|
||||||
|
stg.depth_cross_section[self.combobox_acoustic_data_choice.currentIndex()].shape[1], axis=1)
|
||||||
|
print("kt3D shape ", kt3D.shape)
|
||||||
|
print("kt3D ", kt3D)
|
||||||
|
|
||||||
|
J_cross_section_freq1 = self.inv_hc.j_cross_section(
|
||||||
|
BS=stg.BS_stream_bed[self.combobox_acoustic_data_choice.currentIndex()][self.combobox_freq1.currentIndex(), :, :],
|
||||||
|
r2D=depth_2D[self.combobox_freq1.currentIndex(), :, :],
|
||||||
|
kt=kt3D[self.combobox_freq1.currentIndex(), :, :])
|
||||||
|
|
||||||
|
J_cross_section_freq2 = self.inv_hc.j_cross_section(
|
||||||
|
BS=stg.BS_stream_bed[self.combobox_acoustic_data_choice.currentIndex()][
|
||||||
|
self.combobox_freq2.currentIndex(), :, :],
|
||||||
|
r2D=depth_2D[self.combobox_freq2.currentIndex(), :, :],
|
||||||
|
kt=kt3D[self.combobox_freq2.currentIndex(), :, :])
|
||||||
|
|
||||||
|
elif stg.BS_cross_section[self.combobox_acoustic_data_choice.currentIndex()].shape != (0,):
|
||||||
|
|
||||||
|
depth_2D = np.zeros(stg.BS_cross_section[self.combobox_acoustic_data_choice.currentIndex()].shape)
|
||||||
|
for f, _ in enumerate(stg.freq[self.combobox_acoustic_data_choice.currentIndex()]):
|
||||||
|
depth_2D[f, :, :] = np.repeat(
|
||||||
|
np.transpose(stg.depth_cross_section[self.combobox_acoustic_data_choice.currentIndex()]
|
||||||
|
[self.combobox_freq1.currentIndex()])[:, np.newaxis],
|
||||||
|
stg.time_cross_section[self.combobox_acoustic_data_choice.currentIndex()].shape[1],
|
||||||
|
axis=1)
|
||||||
|
|
||||||
|
if stg.kt_corrected[self.combobox_acoustic_data_choice.currentIndex()]:
|
||||||
|
kt2D = np.repeat(np.array(stg.kt_corrected[self.combobox_acoustic_data_choice.currentIndex()]),
|
||||||
|
stg.depth_cross_section[self.combobox_acoustic_data_choice.currentIndex()].shape[1],
|
||||||
|
axis=1)
|
||||||
|
kt3D = np.repeat(kt2D[:, :, np.newaxis],
|
||||||
|
stg.freq[self.combobox_acoustic_data_choice.currentIndex()].shape[0], axis=2)
|
||||||
|
else:
|
||||||
|
kt2D = np.repeat(np.array(stg.kt_read[self.combobox_acoustic_data_choice.currentIndex()]),
|
||||||
|
stg.depth_cross_section[self.combobox_acoustic_data_choice.currentIndex()].shape[1],
|
||||||
|
axis=1)
|
||||||
|
kt3D = np.repeat(kt2D[:, :, np.newaxis],
|
||||||
|
stg.freq[self.combobox_acoustic_data_choice.currentIndex()].shape[0], axis=2)
|
||||||
|
|
||||||
|
J_cross_section_freq1 = self.inv_hc.j_cross_section(
|
||||||
|
BS=stg.BS_cross_section[self.combobox_acoustic_data_choice.currentIndex()][
|
||||||
|
self.combobox_freq1.currentIndex(), :, :],
|
||||||
|
r2D=depth_2D[self.combobox_freq1.currentIndex(), :, :],
|
||||||
|
kt=kt3D[self.combobox_freq1.currentIndex(), :, :])
|
||||||
|
|
||||||
|
J_cross_section_freq2 = self.inv_hc.j_cross_section(
|
||||||
|
BS=stg.BS_cross_section[self.combobox_acoustic_data_choice.currentIndex()][
|
||||||
|
self.combobox_freq2.currentIndex(), :, :],
|
||||||
|
r2D=depth_2D[self.combobox_freq2.currentIndex(), :, :],
|
||||||
|
kt=kt3D[self.combobox_freq2.currentIndex(), :, :])
|
||||||
|
|
||||||
|
else:
|
||||||
|
|
||||||
|
depth_2D = np.zeros(stg.BS_raw_data[self.combobox_acoustic_data_choice.currentIndex()].shape)
|
||||||
|
for f, _ in enumerate(stg.freq[self.combobox_acoustic_data_choice.currentIndex()]):
|
||||||
|
depth_2D[f, :, :] = np.repeat(
|
||||||
|
np.transpose(stg.depth[self.combobox_acoustic_data_choice.currentIndex()]
|
||||||
|
[self.combobox_freq1.currentIndex()])[:, np.newaxis],
|
||||||
|
stg.time[self.combobox_acoustic_data_choice.currentIndex()].shape[1],
|
||||||
|
axis=1)
|
||||||
|
|
||||||
|
if stg.kt_corrected[self.combobox_acoustic_data_choice.currentIndex()]:
|
||||||
|
kt2D = np.repeat(np.array(stg.kt_corrected[self.combobox_acoustic_data_choice.currentIndex()]),
|
||||||
|
stg.depth[self.combobox_acoustic_data_choice.currentIndex()].shape[1],
|
||||||
|
axis=1)
|
||||||
|
kt3D = np.repeat(kt2D[:, :, np.newaxis],
|
||||||
|
stg.freq[self.combobox_acoustic_data_choice.currentIndex()].shape[0], axis=2)
|
||||||
|
else:
|
||||||
|
kt2D = np.repeat(np.array(stg.kt_read[self.combobox_acoustic_data_choice.currentIndex()]),
|
||||||
|
stg.depth[self.combobox_acoustic_data_choice.currentIndex()].shape[1],
|
||||||
|
axis=1)
|
||||||
|
kt3D = np.repeat(kt2D[:, :, np.newaxis],
|
||||||
|
stg.freq[self.combobox_acoustic_data_choice.currentIndex()].shape[0], axis=2)
|
||||||
|
|
||||||
|
J_cross_section_freq1 = self.inv_hc.j_cross_section(
|
||||||
|
BS=stg.BS_raw_data[self.combobox_acoustic_data_choice.currentIndex()][
|
||||||
|
self.combobox_freq1.currentIndex(), :, :],
|
||||||
|
r2D=depth_2D[self.combobox_freq1.currentIndex(), :, :],
|
||||||
|
kt=kt3D[self.combobox_freq1.currentIndex(), :, :])
|
||||||
|
|
||||||
|
J_cross_section_freq2 = self.inv_hc.j_cross_section(
|
||||||
|
BS=stg.BS_raw_data[self.combobox_acoustic_data_choice.currentIndex()][
|
||||||
|
self.combobox_freq2.currentIndex(), :, :],
|
||||||
|
r2D=depth_2D[self.combobox_freq2.currentIndex(), :, :],
|
||||||
|
kt=kt3D[self.combobox_freq2.currentIndex(), :, :])
|
||||||
|
|
||||||
|
print("J_cross_section_freq1.shape ", J_cross_section_freq1.shape)
|
||||||
|
print("J_cross_section_freq2.shape ", J_cross_section_freq2.shape)
|
||||||
|
|
||||||
|
# --- Compute alpha_s ---
|
||||||
|
if stg.depth_cross_section[self.combobox_acoustic_data_choice.currentIndex()].shape != (0,):
|
||||||
|
|
||||||
|
alpha_s_freq1 = self.inv_hc.alpha_s(
|
||||||
|
sv=sv_freq1,
|
||||||
|
j_cross_section=J_cross_section_freq1[stg.sand_sample_target_indice[0][0],
|
||||||
|
stg.sand_sample_target_indice[0][1]],
|
||||||
|
depth=stg.depth_cross_section[self.combobox_acoustic_data_choice.currentIndex()][
|
||||||
|
self.combobox_freq1.currentIndex(), stg.sand_sample_target_indice[0][0]],
|
||||||
|
alpha_w=stg.water_attenuation[self.combobox_acoustic_data_choice.currentIndex()][
|
||||||
|
self.combobox_freq1.currentIndex()])
|
||||||
|
|
||||||
|
alpha_s_freq2 = self.inv_hc.alpha_s(
|
||||||
|
sv=sv_freq2,
|
||||||
|
j_cross_section=J_cross_section_freq2[stg.sand_sample_target_indice[1][0],
|
||||||
|
stg.sand_sample_target_indice[1][1]],
|
||||||
|
depth=stg.depth_cross_section[self.combobox_acoustic_data_choice.currentIndex()][
|
||||||
|
self.combobox_freq2.currentIndex(), stg.sand_sample_target_indice[1][0]],
|
||||||
|
alpha_w=stg.water_attenuation[self.combobox_acoustic_data_choice.currentIndex()][
|
||||||
|
self.combobox_freq2.currentIndex()])
|
||||||
|
|
||||||
|
else:
|
||||||
|
|
||||||
|
alpha_s_freq1 = self.inv_hc.alpha_s(
|
||||||
|
sv=sv_freq1,
|
||||||
|
j_cross_section=J_cross_section_freq1[stg.sand_sample_target_indice[0][0],
|
||||||
|
stg.sand_sample_target_indice[0][1]],
|
||||||
|
depth=stg.depth[self.combobox_acoustic_data_choice.currentIndex()][
|
||||||
|
self.combobox_freq1.currentIndex(), stg.sand_sample_target_indice[0][0]],
|
||||||
|
alpha_w=stg.water_attenuation[self.combobox_acoustic_data_choice.currentIndex()][
|
||||||
|
self.combobox_freq1.currentIndex()])
|
||||||
|
|
||||||
|
alpha_s_freq2 = self.inv_hc.alpha_s(
|
||||||
|
sv=sv_freq2,
|
||||||
|
j_cross_section=J_cross_section_freq2[stg.sand_sample_target_indice[1][0],
|
||||||
|
stg.sand_sample_target_indice[1][1]],
|
||||||
|
depth=stg.depth[self.combobox_acoustic_data_choice.currentIndex()][
|
||||||
|
self.combobox_freq2.currentIndex(), stg.sand_sample_target_indice[1][0]],
|
||||||
|
alpha_w=stg.water_attenuation[self.combobox_acoustic_data_choice.currentIndex()][
|
||||||
|
self.combobox_freq2.currentIndex()])
|
||||||
|
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||||||
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print(f"\u03B1s for frequency of freq1 : {alpha_s_freq1:.2f} /m \n")
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||||||
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print(f"\u03B1s for frequency of freq2 : {alpha_s_freq2:.2f} /m")
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||||||
|
|
||||||
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self.spinbox_alphas_freq1.clear()
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||||||
|
self.spinbox_alphas_freq1.setValue(alpha_s_freq1)
|
||||||
|
|
||||||
|
self.spinbox_alphas_freq2.clear()
|
||||||
|
self.spinbox_alphas_freq2.setValue(alpha_s_freq2)
|
||||||
|
|
||||||
|
# --- Compute zeta ---
|
||||||
|
|
||||||
|
if stg.depth_cross_section[self.combobox_acoustic_data_choice.currentIndex()].shape != (0,):
|
||||||
|
|
||||||
|
zeta_freq1 = self.inv_hc.zeta(alpha_s=alpha_s_freq1,
|
||||||
|
r=stg.depth_cross_section[self.combobox_acoustic_data_choice.currentIndex()][
|
||||||
|
self.combobox_freq1.currentIndex(), :],
|
||||||
|
M_profile_fine=stg.M_profile_fine)
|
||||||
|
zeta_freq2 = self.inv_hc.zeta(alpha_s=alpha_s_freq2,
|
||||||
|
r=stg.depth_cross_section[self.combobox_acoustic_data_choice.currentIndex()][
|
||||||
|
self.combobox_freq2.currentIndex(), :],
|
||||||
|
M_profile_fine=stg.M_profile_fine)
|
||||||
|
|
||||||
|
else:
|
||||||
|
zeta_freq1 = self.inv_hc.zeta(alpha_s=alpha_s_freq1,
|
||||||
|
r=stg.depth[self.combobox_acoustic_data_choice.currentIndex()][
|
||||||
|
self.combobox_freq1.currentIndex(), :],
|
||||||
|
M_profile_fine=stg.M_profile_fine)
|
||||||
|
zeta_freq2 = self.inv_hc.zeta(alpha_s=alpha_s_freq2,
|
||||||
|
r=stg.depth[self.combobox_acoustic_data_choice.currentIndex()][
|
||||||
|
self.combobox_freq2.currentIndex(), :],
|
||||||
|
M_profile_fine=stg.M_profile_fine)
|
||||||
|
|
||||||
|
print(f"\u03B6 for frequency of freq1 : {zeta_freq1:.3f} /m \n")
|
||||||
|
print(f"\u03B6 for frequency of freq2 : {zeta_freq2:.3f} /m")
|
||||||
|
|
||||||
|
self.spinbox_zeta_freq1.clear()
|
||||||
|
self.spinbox_zeta_freq1.setValue(zeta_freq1)
|
||||||
|
|
||||||
|
self.spinbox_zeta_freq2.clear()
|
||||||
|
self.spinbox_zeta_freq2.setValue(zeta_freq2)
|
||||||
|
|
||||||
|
|
|
||||||
|
|
@ -148,10 +148,14 @@ frac_vol_sand = [] # Volume fraction (%)
|
||||||
frac_vol_sand_cumul = [] # Cumulated volume fraction (%)
|
frac_vol_sand_cumul = [] # Cumulated volume fraction (%)
|
||||||
|
|
||||||
sand_sample_target = [] # Sand sample target for calibration
|
sand_sample_target = [] # Sand sample target for calibration
|
||||||
|
sand_sample_target_indice = []
|
||||||
|
|
||||||
Ctot_fine_per_cent = []
|
Ctot_fine_per_cent = []
|
||||||
Ctot_sand_per_cent = []
|
Ctot_sand_per_cent = []
|
||||||
|
|
||||||
|
range_lin_interp = []
|
||||||
|
M_profile_fine = []
|
||||||
|
|
||||||
# --- Acoustic inversion method ---
|
# --- Acoustic inversion method ---
|
||||||
|
|
||||||
temperature = []
|
temperature = []
|
||||||
|
|
|
||||||
Loading…
Reference in New Issue