Acoutic data: Minor change.

.gitignore

@@ -1,6 +1,9 @@
 TAGS
 Error_file.txt
 
+# Windows executable file
+*.exe
+
 # Created by https://www.toptal.com/developers/gitignore/api/python
 # Edit at https://www.toptal.com/developers/gitignore?templates=python
 

View/acoustic_data_tab.py

@@ -294,6 +294,8 @@ class AcousticDataTab(QWidget):
         self.groupbox_gps = QGroupBox()
         self.groupbox_gps.setTitle("Convert recording time to distance from bank")
         self.horizontal_gps_input_data = QHBoxLayout(self.groupbox_gps)
+        self.groupbox_gps.setEnabled(False)
+
 
         self.verticalLayout_groupbox_display_option.addWidget(self.groupbox_gps)
 
@@ -445,34 +447,61 @@ class AcousticDataTab(QWidget):
         # ---------------------------------
 
         self.label_distance_from_bank = QLabel("Distance from bank")
-        self.gridLayout_groupbox_display_option_limits.addWidget(self.label_distance_from_bank, 3, 0, 1, 1, Qt.AlignRight)
+        self.gridLayout_groupbox_display_option_limits.addWidget(
+            self.label_distance_from_bank,
+            3, 0, 1, 1, Qt.AlignRight
+        )
+        self.label_distance_from_bank.setEnabled(False)
 
         self.label_distance_from_bank_min = QLabel()
         self.label_distance_from_bank_min.setText("0.00")
-        self.gridLayout_groupbox_display_option_limits.addWidget(self.label_distance_from_bank_min, 3, 1, 1, 1, Qt.AlignCenter)
+        self.gridLayout_groupbox_display_option_limits.addWidget(
+            self.label_distance_from_bank_min,
+            3, 1, 1, 1, Qt.AlignCenter
+        )
+        self.label_distance_from_bank_min.setEnabled(False)
 
         self.lineEdit_distance_from_bank_min_limits = QLineEdit()
         self.lineEdit_distance_from_bank_min_limits.setText("0.00")
         self.lineEdit_distance_from_bank_min_limits.setMaximumWidth(80)
-        self.gridLayout_groupbox_display_option_limits.addWidget(self.lineEdit_distance_from_bank_min_limits, 3, 2, 1, 1,
+        self.gridLayout_groupbox_display_option_limits.addWidget(
-                                                                 Qt.AlignCenter)
+            self.lineEdit_distance_from_bank_min_limits,
+            3, 2, 1, 1, Qt.AlignCenter
+        )
+        self.lineEdit_distance_from_bank_min_limits.setEnabled(False)
 
         self.lineEdit_distance_from_bank_max_limits = QLineEdit()
         self.lineEdit_distance_from_bank_max_limits.setText("0.00")
         self.lineEdit_distance_from_bank_max_limits.setMaximumWidth(80)
-        self.gridLayout_groupbox_display_option_limits.addWidget(self.lineEdit_distance_from_bank_max_limits, 3, 3, 1, 1,
+        self.gridLayout_groupbox_display_option_limits.addWidget(
-                                                                 Qt.AlignCenter)
+            self.lineEdit_distance_from_bank_max_limits,
+            3, 3, 1, 1, Qt.AlignCenter
+        )
+        self.lineEdit_distance_from_bank_max_limits.setEnabled(False)
 
         self.label_distance_from_bank_max = QLabel()
         self.label_distance_from_bank_max.setText("0.00")
-        self.gridLayout_groupbox_display_option_limits.addWidget(self.label_distance_from_bank_max, 3, 4, 1, 1, Qt.AlignCenter)
+        self.gridLayout_groupbox_display_option_limits.addWidget(
+            self.label_distance_from_bank_max,
+            3, 4, 1, 1, Qt.AlignCenter
+        )
+        self.label_distance_from_bank_max.setEnabled(False)
 
         self.label_distance_from_bank_unit_meter = QLabel("meters")
-        self.gridLayout_groupbox_display_option_limits.addWidget(self.label_distance_from_bank_unit_meter, 3, 5, 1, 1, Qt.AlignCenter)
+        self.gridLayout_groupbox_display_option_limits.addWidget(
+            self.label_distance_from_bank_unit_meter,
+            3, 5, 1, 1, Qt.AlignCenter
+        )
+        self.label_distance_from_bank_unit_meter.setEnabled(False)
 
         self.pushbutton_apply_distance_from_bank_limits = QPushButton()
         self.pushbutton_apply_distance_from_bank_limits.setIcon(self.icon_apply_limits)
-        self.gridLayout_groupbox_display_option_limits.addWidget(self.pushbutton_apply_distance_from_bank_limits, 3, 6, 1, 1)
+        self.gridLayout_groupbox_display_option_limits.addWidget(
+            self.pushbutton_apply_distance_from_bank_limits,
+            3, 6, 1, 1
+        )
+        self.pushbutton_apply_distance_from_bank_limits.setEnabled(False)
+
 
         # ---------------------------------------
 
@@ -747,6 +776,7 @@ class AcousticDataTab(QWidget):
         self.groupbox_transect_2Dplot_raw_BS_data.setTitle(_translate("CONSTANT_STRING", cs.RAW_ACOUSTIC_DATA_2D_FIELD))
 
     def fileListWidget_event(self):
+        self.fileListWidget.blockSignals(True)
 
         self.print_selected_file()
         self.fill_measurements_information_groupbox()
@@ -760,6 +790,8 @@ class AcousticDataTab(QWidget):
         self.update_plot_profile()
         self.set_range_for_spinboxes_bathymetry()
 
+        self.fileListWidget.blockSignals(False)
+
     def print_selected_file(self):
         print(f"Selected file in list widget : {self.fileListWidget.selectedItems()}")
         print("self.fileListWidget.selectedItems()[1:] : ", self.fileListWidget.selectedItems()[1:])
@@ -1359,7 +1391,6 @@ class AcousticDataTab(QWidget):
                 self.fileListWidget.blockSignals(False)
 
     def rename_file_in_ListWidget(self, event):
-
         if event == QEvent.MouseButtonPress:
             print("c'est bon")
             if event.button == Qt.RightButton:
@@ -1372,144 +1403,69 @@ class AcousticDataTab(QWidget):
             menu.addAction('Rename')
 
     def remove_file_from_ListWidget(self):
-        if self.fileListWidget.count() > 0:
+        if self.fileListWidget.count() <= 0:
+            return
 
-            # --- Clear files included in list Widget ---
+        self.fileListWidget.blockSignals(True)
-            current_row = self.fileListWidget.currentRow()
-            if current_row >= 0:
-                current_item = self.fileListWidget.takeItem(current_row)
-                del current_item
 
-            # --- Clear variables ---
+        # --- Clear files included in list Widget ---
-            list_to_pop1 = [
+        current_row = self.fileListWidget.currentRow()
-                "stg.acoustic_data", "stg.date", "stg.hour",
+        if current_row >= 0:
-                "stg.freq", "stg.freq_text",
+            current_item = self.fileListWidget.takeItem(current_row)
-                "stg.nb_profiles", "stg.nb_profiles_per_sec",
+            del current_item
-                "stg.nb_cells", "stg.cell_size",
-                "stg.pulse_length", "stg.nb_pings_per_sec",
-                "stg.nb_pings_averaged_per_profile",
-                "stg.kt_read", "stg.kt_corrected", "stg.gain_rx", "stg.gain_tx",
-                "stg.filename_BS_raw_data", "stg.path_BS_raw_data",
-                "stg.BS_raw_data", "stg.time", "stg.depth",
-                "stg.BS_raw_data_reshape", "stg.time_reshape", "stg.depth_reshape"
-            ]
 
-            for p in list_to_pop1:
+        # --- Clear variables ---
-                if isinstance(eval(p), list):
+        list_to_pop1 = [
-                    exec(p + ".pop(current_row)")
+            stg.acoustic_data, stg.date, stg.hour,
-
+            stg.freq, stg.freq_text,
-            if stg.BS_cross_section:
+            stg.nb_profiles, stg.nb_profiles_per_sec,
-
+            stg.nb_cells, stg.cell_size,
-                list_to_pop2 = ["stg.rmin", "stg.rmax", "stg.tmin", "stg.tmax",
+            stg.pulse_length, stg.nb_pings_per_sec,
-                                "stg.time_cross_section", "stg.depth_cross_section", "stg.BS_cross_section"]
+            stg.nb_pings_averaged_per_profile,
-
+            stg.kt_read, stg.kt_corrected, stg.gain_rx, stg.gain_tx,
-                for k in list_to_pop2:
+            stg.filename_BS_raw_data, stg.path_BS_raw_data,
-                    exec(k + ".pop(current_row)")
+            stg.BS_raw_data, stg.time, stg.depth,
-
+            stg.BS_raw_data_reshape, stg.time_reshape, stg.depth_reshape
-            if stg.BS_stream_bed:
-
-                list_to_pop3 = ["stg.BS_stream_bed", "stg.depth_bottom",
-                                "stg.val_bottom", "stg.ind_bottom", "stg.freq_bottom_detection"]
-
-                for s in list_to_pop3:
-                    exec(s + ".pop(current_row)")
-
-            if self.fileListWidget.count() == 0:
-
-                # --- Clear measurements information ---
-                self.label_date_acoustic_file.clear()
-                self.label_date_acoustic_file.setText("Date: ")
-                self.label_hour_acoustic_file.clear()
-                self.label_hour_acoustic_file.setText("Hour: ")
-                self.lineEdit_sound_attenuation.setText("0.00")
-                self.combobox_frequency_information.clear()
-                self.label_profiles_value.clear()
-                self.label_profiles_per_sec_value.clear()
-                self.label_cells_value.clear()
-                self.label_cell_size_value.clear()
-                self.label_pulse_length_value.clear()
-                self.label_pings_per_sec_value.clear()
-                self.label_pings_per_profile_value.clear()
-                self.lineEdit_kt.setText("0.00")
-                self.lineEdit_rx.setText("0.00")
-                self.lineEdit_tx.setText("0.00")
-
-                # --- Clear display options ---
-
-                self.label_time_min.setText("0.00")
-                self.lineEdit_time_min_limits.setText("0.00")
-                self.lineEdit_time_max_limits.setText("0.00")
-                self.label_time_max.setText("0.00")
-
-                self.label_depth_min.setText("0.00")
-                self.lineEdit_depth_min_limits.setText("0.00")
-                self.lineEdit_depth_max_limits.setText("0.00")
-                self.label_depth_max.setText("0.00")
-
-                self.label_distance_from_bank_min.setText("0.00")
-                self.lineEdit_distance_from_bank_min_limits.setText("0.00")
-                self.lineEdit_distance_from_bank_max_limits.setText("0.00")
-                self.label_distance_from_bank_max.setText("0.00")
-
-                self.combobox_frequency_bathymetry.clear()
-                self.lineEdit_depth_min_bathy.setText("0.00")
-                self.lineEdit_depth_max_bathy.setText("0.00")
-                self.lineEdit_next_cell_bathy.setText("0.00")
-
-                # --- Clear table of values ---
-                self.tableView.reset()
-                data = pd.DataFrame(np.zeros((10, 10)))
-                self.tableModel = TableModel(data)
-                self.tableView.setModel(self.tableModel)
-
-                # --- Clear figure : 2D plot of the acoustic recording ---
-                self.verticalLayout_groupbox_transect_2Dplot_raw_BS_data.removeWidget(self.scroll_BS)
-                self.verticalLayout_groupbox_transect_2Dplot_raw_BS_data.removeWidget(self.toolbar_BS)
-
-                self.canvas_BS = FigureCanvas()
-                self.toolbar_BS = NavigationToolBar(self.canvas_BS, self)
-                self.scroll_BS.setWidget(self.canvas_BS)
-
-                self.verticalLayout_groupbox_transect_2Dplot_raw_BS_data.addWidget(self.toolbar_BS)
-                self.verticalLayout_groupbox_transect_2Dplot_raw_BS_data.addWidget(self.scroll_BS)
-
-                # --- Clear figure : profile ---
-                self.combobox_frequency_profile.clear()
-
-                self.verticalLayout_groupbox_plot_profile.removeWidget(self.canvas_plot_profile)
-                self.verticalLayout_groupbox_plot_profile.removeWidget(self.toolbar_profile)
-
-                self.canvas_plot_profile = FigureCanvas()
-                self.toolbar_profile = NavigationToolBar(self.canvas_plot_profile, self)
-
-                self.verticalLayout_groupbox_plot_profile.addWidget(self.toolbar_profile)
-                self.verticalLayout_groupbox_plot_profile.addWidget(self.canvas_plot_profile)
-
-                self.slider.setValue(0)
-                self.slider.setMaximum(10)
-
-    def clear_files_from_ListWidget(self):
-
-        list_to_clear = [
-            "stg.acoustic_data", "stg.date", "stg.hour",
-            "stg.freq", "stg.freq_text",
-            "stg.nb_profiles", "stg.nb_profiles_per_sec",
-            "stg.nb_cells", "stg.cell_size",
-            "stg.pulse_length", "stg.nb_pings_per_sec",
-            "stg.nb_pings_averaged_per_profile",
-            "stg.kt_read", "stg.kt_corrected", "stg.gain_rx", "stg.gain_tx",
-            "stg.filename_BS_raw_data", "stg.path_BS_raw_data",
-            "stg.BS_raw_data", "stg.time", "stg.depth",
-            "stg.BS_raw_data_reshape", "stg.time_reshape", "stg.depth_reshape",
-            "stg.rmin", "stg.rmax", "stg.tmin", "stg.tmax",
-            "stg.time_cross_section", "stg.depth_cross_section",
-            "stg.BS_cross_section", "stg.BS_stream_bed"
         ]
 
-        for k in list_to_clear:
+        for p in list_to_pop1:
-            if isinstance(eval(k), list):
+            if isinstance(p, list):
-                exec(k + ".clear()")
+                p.pop(current_row)
 
+        if stg.BS_cross_section:
+            list_to_pop2 = [
+                stg.rmin, stg.rmax, stg.tmin, stg.tmax,
+                stg.time_cross_section, stg.depth_cross_section,
+                stg.BS_cross_section
+            ]
+
+            for k in list_to_pop2:
+                k.pop(current_row)
+
+        if stg.BS_stream_bed:
+            list_to_pop3 = [
+                stg.BS_stream_bed, stg.depth_bottom,
+                stg.val_bottom, stg.ind_bottom,
+                stg.freq_bottom_detection
+            ]
+
+            for s in list_to_pop3:
+                s.pop(current_row)
+
+        if self.fileListWidget.count() == 0:
+            self.clear_files_from_ListWidget_reset()
+
+        self.fileListWidget.blockSignals(False)
+
+    def clear_files_from_ListWidget(self):
+        self.fileListWidget.blockSignals(True)
+
+        self.clear_files_data()
+        self.clear_files_from_ListWidget_reset()
+
+        self.fileListWidget.blockSignals(False)
+
+    def clear_files_from_ListWidget_reset(self):
         self.fileListWidget.clear()
         # self.fileListWidget.takeItem(0)
 
@@ -1586,6 +1542,27 @@ class AcousticDataTab(QWidget):
             self.slider.setValue(0)
             self.slider.setMaximum(10)
 
+    def clear_files_data(self):
+        list_to_clear = [
+            stg.acoustic_data, stg.date, stg.hour,
+            stg.freq, stg.freq_text,
+            stg.nb_profiles, stg.nb_profiles_per_sec,
+            stg.nb_cells, stg.cell_size,
+            stg.pulse_length, stg.nb_pings_per_sec,
+            stg.nb_pings_averaged_per_profile,
+            stg.kt_read, stg.kt_corrected, stg.gain_rx, stg.gain_tx,
+            stg.filename_BS_raw_data, stg.path_BS_raw_data,
+            stg.BS_raw_data, stg.time, stg.depth,
+            stg.BS_raw_data_reshape, stg.time_reshape, stg.depth_reshape,
+            stg.rmin, stg.rmax, stg.tmin, stg.tmax,
+            stg.time_cross_section, stg.depth_cross_section,
+            stg.BS_cross_section, stg.BS_stream_bed
+        ]
+
+        for k in list_to_clear:
+            if isinstance(k, list):
+                k.clear()
+
     def load_BS_acoustic_raw_data(self):
         if self.fileListWidget.count() == 0:
             for p, f in zip(stg.path_BS_raw_data,
@@ -1972,7 +1949,7 @@ class AcousticDataTab(QWidget):
             14, 1, 1, 1, Qt.AlignLeft
         )
 
-        if self.checkbox_kt.isChecked():
+        if self.checkbox_kt.isChecked() and len(stg.kt_corrected) > freq_id:
             if self.combobox_frequency_information.count() > 0:
                 self.lineEdit_kt.setText(
                     str("%.4f" % stg.kt_corrected[freq_id])

View/acoustic_inversion_tab.py

@@ -23,6 +23,7 @@
 import os
 import numpy as np
 import pandas as pd
+from math import isinf
 
 from copy import deepcopy
 
@@ -398,6 +399,16 @@ class AcousticInversionTab(QWidget):
             msgBox.setStandardButtons(QMessageBox.Ok)
             msgBox.exec()
 
+        elif  isinf(stg.alpha_s[0]) or isinf(stg.alpha_s[1]):
+
+            msgBox = QMessageBox()
+            msgBox.setWindowTitle("Alpha computation error")
+            msgBox.setIconPixmap(
+                QPixmap(self.path_icon + "no_approved.png").scaledToHeight(32, Qt.SmoothTransformation))
+            msgBox.setText("Sediment sound attenuation is infinite !")
+            msgBox.setStandardButtons(QMessageBox.Ok)
+            msgBox.exec()
+
         else:
 
             self.compute_VBI()

View/sediment_calibration_tab.py

@@ -27,6 +27,7 @@ from scipy.stats import linregress
 
 import numpy as np
 import pandas as pd
+from math import isinf
 
 import matplotlib.pyplot as plt
 from matplotlib.colors import LogNorm
@@ -2246,6 +2247,16 @@ class SedimentCalibrationTab(QWidget):
             msgBox.setStandardButtons(QMessageBox.Ok)
             msgBox.exec()
 
+        elif isinf(alpha_s_freq1) or isinf(alpha_s_freq2):
+
+            msgBox = QMessageBox()
+            msgBox.setWindowTitle("Alpha computation error")
+            msgBox.setIconPixmap(
+                QPixmap(self._path_icon("no_approved.png")).scaledToHeight(32, Qt.SmoothTransformation))
+            msgBox.setText("Sediment sound attenuation is infinite !")
+            msgBox.setStandardButtons(QMessageBox.Ok)
+            msgBox.exec()
+
         else:
 
             msgBox = QMessageBox()