1104 lines
58 KiB
Python
1104 lines
58 KiB
Python
import sys
|
|
|
|
from PyQt5.QtWidgets import QWidget, QVBoxLayout, QHBoxLayout, QGroupBox, QPushButton, QComboBox, QLineEdit, QLabel, \
|
|
QGridLayout, QSpinBox, QDoubleSpinBox, QTableView, QTableWidget, QSpacerItem, QSizePolicy, \
|
|
QAbstractScrollArea, QFileDialog, QTableWidgetItem, QMessageBox, QScrollBar, QScrollArea
|
|
from PyQt5.QtGui import QPixmap, QIcon
|
|
from PyQt5.QtCore import Qt, QCoreApplication, pyqtSignal, pyqtSlot, QEvent
|
|
|
|
import numpy as np
|
|
import pandas as pd
|
|
|
|
import matplotlib.pyplot as plt
|
|
# import matplotlib
|
|
# matplotlib.use("Qt5Agg")
|
|
from matplotlib.colors import LogNorm, CSS4_COLORS, BoundaryNorm
|
|
from matplotlib.backends.backend_qt5agg import FigureCanvasQTAgg as FigureCanvas
|
|
from matplotlib.backends.backend_qt5agg import NavigationToolbar2QT as NavigationToolBar
|
|
|
|
from os import path
|
|
from copy import deepcopy
|
|
|
|
# import Translation.biblio_string as bs
|
|
import Translation.constant_string as cs
|
|
|
|
from Model.TableModel import TableModel
|
|
from Model.AquascatDataLoader import RawAquascatData
|
|
from Model.acoustic_data_loader import AcousticDataLoader
|
|
from View.window_noise_level_averaged_profile import WindowNoiseLevelTailAveragedProfile
|
|
|
|
from View.sample_data_tab import SampleDataTab
|
|
|
|
_translate = QCoreApplication.translate
|
|
|
|
|
|
class AcousticDataTab(QWidget):
|
|
|
|
''' This class generates the Acoustic Data Tab '''
|
|
|
|
def __init__(self, tab_widget):
|
|
super().__init__()
|
|
|
|
path_icon = "./icons/"
|
|
icon_folder = QIcon(path_icon + "folder.png")
|
|
|
|
### --- General layout of widgets ---
|
|
|
|
self.verticalLayoutMain = QVBoxLayout(tab_widget)
|
|
|
|
self.horizontalLayoutTop = QHBoxLayout()
|
|
self.verticalLayoutMain.addLayout(self.horizontalLayoutTop, 4) # 1O units is 100% , 1 units is 10%
|
|
|
|
self.horizontalLayoutBottom = QHBoxLayout()
|
|
self.verticalLayoutMain.addLayout(self.horizontalLayoutBottom, 6)
|
|
|
|
### --- Layout of groupbox in the Top horizontal layout box
|
|
|
|
# Download | Measurement information | Table of values | Display options
|
|
|
|
self.groupbox_download = QGroupBox()
|
|
self.horizontalLayoutTop.addWidget(self.groupbox_download, 3)
|
|
|
|
self.groupbox_info = QGroupBox()
|
|
self.horizontalLayoutTop.addWidget(self.groupbox_info, 3)
|
|
|
|
self.groupbox_table = QGroupBox()
|
|
self.horizontalLayoutTop.addWidget(self.groupbox_table, 4)
|
|
|
|
self.groupbox_display_option = QGroupBox()
|
|
self.horizontalLayoutTop.addWidget(self.groupbox_display_option, 3)
|
|
|
|
### --- Layout of groupbox in the Bottom horizontal layout box
|
|
|
|
# 2D field of raw acoustic backscatter data | 2D field of Signal to Noise ratio
|
|
|
|
self.groupbox_transect_2Dplot_raw_BS_data = QGroupBox()
|
|
self.horizontalLayoutBottom.addWidget(self.groupbox_transect_2Dplot_raw_BS_data)
|
|
|
|
self.groupbox_transect_2Dplot_snr_data = QGroupBox()
|
|
self.horizontalLayoutBottom.addWidget(self.groupbox_transect_2Dplot_snr_data)
|
|
|
|
# =====================================================
|
|
# TOP HORIZONTAL BOX LAYOUT
|
|
# =====================================================
|
|
|
|
# +++++++++++++++++++++++++++
|
|
# | Group box Download file |
|
|
# +++++++++++++++++++++++++++
|
|
|
|
self.verticalLayout_groupbox_download = QVBoxLayout(self.groupbox_download)
|
|
|
|
# --- Group box acoustic file ---
|
|
|
|
self.groupbox_acoustic_file = QGroupBox()
|
|
self.gridLayout_groupbox_acoustic_file = QGridLayout(self.groupbox_acoustic_file)
|
|
|
|
self.combobox_ABS_system_choice = QComboBox()
|
|
self.combobox_ABS_system_choice.addItems([" ", "Aquascat 1000R", "UB-SediFlow"])
|
|
self.gridLayout_groupbox_acoustic_file.addWidget(self.combobox_ABS_system_choice, 0, 0, 1, 1)
|
|
self.pushbutton_acoustic_file = QPushButton()
|
|
self.pushbutton_acoustic_file.setObjectName("pushbutton_acoustic_file")
|
|
self.pushbutton_acoustic_file.setIcon(icon_folder)
|
|
self.gridLayout_groupbox_acoustic_file.addWidget(self.pushbutton_acoustic_file, 0, 1, 1, 1)
|
|
self.lineEdit_acoustic_file = QLineEdit()
|
|
self.gridLayout_groupbox_acoustic_file.addWidget(self.lineEdit_acoustic_file, 0, 2, 1, 1)
|
|
|
|
self.label_date_groupbox_acoustic_file = QLabel()
|
|
self.gridLayout_groupbox_acoustic_file.addWidget(self.label_date_groupbox_acoustic_file, 1, 0, 1, 2)
|
|
self.label_hour_groupbox_acoustic_file = QLabel()
|
|
self.gridLayout_groupbox_acoustic_file.addWidget(self.label_hour_groupbox_acoustic_file, 1, 2, 1, 1)
|
|
|
|
# Download Push Button event : connect button clicked signal to open file slot
|
|
self.pushbutton_acoustic_file.clicked.connect(self.open_dialog_box)
|
|
|
|
self.verticalLayout_groupbox_download.addWidget(self.groupbox_acoustic_file)
|
|
|
|
# --- Group box noise file ---
|
|
|
|
self.groupbox_noise_file = QGroupBox()
|
|
self.gridLayout_groupbox_noise_file = QGridLayout(self.groupbox_noise_file)
|
|
|
|
self.pushbutton_noise_level_with_tail_of_mean_profile = QPushButton()
|
|
self.gridLayout_groupbox_noise_file.addWidget(self.pushbutton_noise_level_with_tail_of_mean_profile, 0, 0, 1, 1)
|
|
self.pushbutton_noise_file = QPushButton()
|
|
self.pushbutton_noise_file.setObjectName("pushbutton_noise_file")
|
|
self.pushbutton_noise_file.setIcon(icon_folder)
|
|
self.gridLayout_groupbox_noise_file.addWidget(self.pushbutton_noise_file, 0, 1, 1, 1)
|
|
self.lineEdit_noise_file = QLineEdit()
|
|
self.gridLayout_groupbox_noise_file.addWidget(self.lineEdit_noise_file, 0, 2, 1, 1)
|
|
|
|
self.label_date_groupbox_noise_file = QLabel()
|
|
self.gridLayout_groupbox_noise_file.addWidget(self.label_date_groupbox_noise_file, 1, 0, 1, 2)
|
|
self.label_hour_groupbox_noise_file = QLabel()
|
|
self.gridLayout_groupbox_noise_file.addWidget(self.label_hour_groupbox_noise_file, 1, 2, 1, 1)
|
|
|
|
# Download Push Button event : connect button clicked signal to open file slot
|
|
self.pushbutton_noise_file.clicked.connect(self.open_dialog_box)
|
|
|
|
self.verticalLayout_groupbox_download.addWidget(self.groupbox_noise_file)
|
|
|
|
# --- Group box GPS file ---
|
|
|
|
self.groupbox_gps_file = QGroupBox()
|
|
self.gridLayout_groupbox_gps_file = QGridLayout(self.groupbox_gps_file)
|
|
|
|
self.combobox_gps_system_choice = QComboBox()
|
|
self.combobox_gps_system_choice.addItems([" ", "GPS1", "GPS2", "no GPS"])
|
|
self.gridLayout_groupbox_gps_file.addWidget(self.combobox_gps_system_choice, 0, 0, 1, 1)
|
|
self.pushbutton_gps_file = QPushButton()
|
|
self.pushbutton_gps_file.setIcon(icon_folder)
|
|
self.gridLayout_groupbox_gps_file.addWidget(self.pushbutton_gps_file, 0, 1, 1, 1)
|
|
self.lineEdit_gps_file = QLineEdit()
|
|
self.gridLayout_groupbox_gps_file.addWidget(self.lineEdit_gps_file, 0, 2, 1, 1)
|
|
|
|
self.label_date_groupbox_gps_file = QLabel()
|
|
self.gridLayout_groupbox_gps_file.addWidget(self.label_date_groupbox_gps_file, 1, 0, 1, 2)
|
|
self.label_hour_groupbox_gps_file = QLabel()
|
|
self.gridLayout_groupbox_gps_file.addWidget(self.label_hour_groupbox_gps_file, 1, 2, 1, 1)
|
|
|
|
# Download Push Button event : connect button clicked signal to open file slot
|
|
# self.pushButton_gpsfile.clicked.connect(self.open_dialog_box)
|
|
|
|
self.verticalLayout_groupbox_download.addWidget(self.groupbox_gps_file)
|
|
|
|
# --- Time offset line between ABS system time and GPS time ---
|
|
|
|
self.gridLayout_time_offset = QGridLayout()
|
|
self.label_time_offset = QLabel()
|
|
self.gridLayout_time_offset.addWidget(self.label_time_offset, 0, 0, 1, 1)
|
|
self.label_acoustic_gps_time = QLabel()
|
|
self.label_acoustic_gps_time.setText(
|
|
"T<span style= vertical-align:sub>acoustic</span> =" + " T<span style= vertical-align:sub>gps</span>")
|
|
self.gridLayout_time_offset.addWidget(self.label_acoustic_gps_time, 0, 1, 1, 1)
|
|
self.combobox_plus_minus = QComboBox()
|
|
self.combobox_plus_minus.addItem("+")
|
|
self.combobox_plus_minus.addItem("-")
|
|
self.gridLayout_time_offset.addWidget(self.combobox_plus_minus, 0, 2, 1, 1)
|
|
self.spinbox_time_offset_value = QSpinBox()
|
|
self.gridLayout_time_offset.addWidget(self.spinbox_time_offset_value, 0, 3, 1, 1)
|
|
self.label_seconds = QLabel()
|
|
self.label_seconds.setText("sec")
|
|
self.gridLayout_time_offset.addWidget(self.label_seconds, 0, 4, 1, 1)
|
|
self.verticalLayout_groupbox_download.addLayout(self.gridLayout_time_offset)
|
|
|
|
# ++++++++++++++++++++++++++++++++++++++
|
|
# | Group Box Measurements information |
|
|
# ++++++++++++++++++++++++++++++++++++++
|
|
|
|
self.gridLayout_goupbox_info = QGridLayout(self.groupbox_info)
|
|
|
|
self.label_profiles = QLabel()
|
|
self.label_profiles_per_sec = QLabel()
|
|
self.label_cells = QLabel()
|
|
self.label_cell_size = QLabel()
|
|
self.label_pulse_length = QLabel()
|
|
self.label_pings_per_sec = QLabel()
|
|
self.label_pings_per_profile = QLabel()
|
|
self.label_freq = QLabel()
|
|
self.label_kt = QLabel()
|
|
self.label_rx = QLabel()
|
|
self.label_tx = QLabel()
|
|
|
|
self.label_to_do = QLabel()
|
|
self.label_to_do.setText("UBSediFlow data : to do for Oct. 20th")
|
|
|
|
# self.groupbox_measurement_information_Aquascat()
|
|
self.combobox_ABS_system_choice.currentTextChanged.connect(self.ABS_system_choice)
|
|
|
|
# +++++++++++++++++++++++++++++
|
|
# | Group Box Table of values |
|
|
# +++++++++++++++++++++++++++++
|
|
|
|
self.verticalLayout_groupbox_table = QVBoxLayout(self.groupbox_table)
|
|
|
|
self.horizontalLayout_pushbutton_fill_export_table = QHBoxLayout()
|
|
self.pushbutton_fill_table = QPushButton()
|
|
self.horizontalLayout_pushbutton_fill_export_table.addWidget(self.pushbutton_fill_table)
|
|
|
|
self.pushbutton_fill_table.clicked.connect(self.fill_table)
|
|
|
|
self.horizontalSpacerItem_between_pushbutton_fill_export_table = QSpacerItem(50, 10,
|
|
QSizePolicy.Expanding, QSizePolicy.Minimum)
|
|
self.horizontalLayout_pushbutton_fill_export_table.addItem(
|
|
self.horizontalSpacerItem_between_pushbutton_fill_export_table)
|
|
|
|
self.pushbutton_export_table = QPushButton()
|
|
self.horizontalLayout_pushbutton_fill_export_table.addWidget(self.pushbutton_export_table)
|
|
|
|
self.pushbutton_export_table.clicked.connect(self.export_table)
|
|
|
|
self.verticalLayout_groupbox_table.addLayout(self.horizontalLayout_pushbutton_fill_export_table)
|
|
|
|
# self.tableWidget = QTableWidget()
|
|
# self.tableWidget.setRowCount(10)
|
|
# self.tableWidget.setColumnCount(10)
|
|
|
|
self.tableView = QTableView()
|
|
data = pd.DataFrame(np.zeros((10, 10)))
|
|
self.tableModel = TableModel(data)
|
|
self.tableView.setModel(self.tableModel)
|
|
self.verticalLayout_groupbox_table.addWidget(self.tableView)
|
|
|
|
# #------------------------------------
|
|
# # self.tableView = QTableView()
|
|
# # self.tableView.setSizeAdjustPolicy(QAbstractScrollArea.AdjustToContentsOnFirstShow)
|
|
# # self.tableView.horizontalHeader().setStretchLastSection(True)
|
|
# #
|
|
# # df, tension, freq, depth = self._model.acoustic_data()
|
|
# # print(np.zeros(len(tension), dtype=int))
|
|
# # print("dimension", list(tension))
|
|
# # self.data = pd.DataFrame({'Time (sec)': np.zeros(10, dtype=int),
|
|
# # 'y (m)': np.zeros(10, dtype=int),
|
|
# # 'z (m)': np.zeros(10, dtype=int),
|
|
# # 'Frequency (MHz)': np.zeros(10, dtype=int),
|
|
# # 'Voltage (V)': np.zeros(10, dtype=int),
|
|
# # 'SNR': np.zeros(10, dtype=int)})
|
|
# # self.data = pd.DataFrame({'Time (sec)': np.zeros(len(tension), dtype=int),
|
|
# # 'y (m)': np.zeros(len(tension), dtype=int),
|
|
# # 'z (m)': np.zeros(len(tension), dtype=int),
|
|
# # 'Frequency (Hz)': df['freq'],
|
|
# # 'Voltage (V)': df['tension'],
|
|
# # 'SNR': np.zeros(len(tension), dtype=int)})
|
|
# # self.data.reset_index(drop=True, inplace=True)
|
|
# # self.data = self._model.acoustic_data_table
|
|
# #
|
|
# # self.tableModel = TableModel(self.data)
|
|
# # self.tableView.setModel(self.tableModel)
|
|
# # self.verticalLayout_groupboxtable.addWidget(self.tableView)
|
|
# # ------------------------------------
|
|
#
|
|
# self.tableWidget = QTableWidget()
|
|
# self.tableWidget.setRowCount(10)
|
|
# self.tableWidget.setColumnCount(10)
|
|
# #
|
|
# # print("tablewidget = ", self.tableWidget)
|
|
# #
|
|
# # self.tableWidget2 = TableWidget(3, 3)
|
|
# # print("tablewidget2 = ", self.tableWidget2)
|
|
#
|
|
# # for i in range(10):
|
|
# # for j in range(10):
|
|
# # item_v = QTableWidgetItem()
|
|
# # self.tableWidget.setVerticalHeaderItem(i, item_v)
|
|
# # item_h = QTableWidgetItem()
|
|
# # self.tableWidget.setHorizontalHeaderItem(j, item_h)
|
|
#
|
|
# # Fill table Push Button event
|
|
# # 1st : connect widgets to controllers = fill table
|
|
# self.pushbutton_fill_table_acousic.clicked.connect(self.fill_table) # self.on_pushButtonFillTable_clicked
|
|
# # 2nd : listen for model event signals = table is filled
|
|
# # self._model.BS_data_updated.connect(self.on_BS_data_updated)
|
|
#
|
|
# self.verticalLayout_groupboxtable.addWidget(self.tableWidget)
|
|
# # self.verticalLayout_groupboxtable.addWidget(self.tableView)
|
|
|
|
# ++++++++++++++++++++++++++++
|
|
# | Group Box Display option |
|
|
# ++++++++++++++++++++++++++++
|
|
|
|
self.verticalLayout_display_option = QVBoxLayout(self.groupbox_display_option)
|
|
|
|
# --- Push buttons to trigger plot of transect with Backscatter acoustic raw data and SNR ---
|
|
|
|
self.horizontalLayout_pushbutton_plot_BS_SNR_data = QHBoxLayout()
|
|
self.verticalLayout_display_option.addLayout(self.horizontalLayout_pushbutton_plot_BS_SNR_data)
|
|
|
|
self.pushbutton_plot_transect_with_BS_raw_data = QPushButton()
|
|
self.horizontalLayout_pushbutton_plot_BS_SNR_data.addWidget(self.pushbutton_plot_transect_with_BS_raw_data)
|
|
|
|
self.pushbutton_plot_transect_with_BS_raw_data.clicked.connect(self.plot_transect_with_BS_raw_data)
|
|
|
|
self.pushbutton_plot_transect_with_SNR_data = QPushButton()
|
|
self.horizontalLayout_pushbutton_plot_BS_SNR_data.addWidget(self.pushbutton_plot_transect_with_SNR_data)
|
|
|
|
self.pushbutton_plot_transect_with_SNR_data.clicked.connect(self.plot_transect_with_SNR_data)
|
|
|
|
# --- Group Box Plot x-axis in time ---
|
|
|
|
self.groupbox_xaxis_time = QGroupBox()
|
|
# self.groupbox_xaxis_time.setCheckable(True)
|
|
# self.groupbox_xaxis_time.setChecked(True)
|
|
# self.groupbox_xaxis_time.clicked.connect(self.transect_xaxis_choice)
|
|
self.verticalLayout_display_option.addWidget(self.groupbox_xaxis_time)
|
|
|
|
self.gridLayout_groupbox_xaxis_time = QGridLayout(self.groupbox_xaxis_time)
|
|
self.label_from = QLabel()
|
|
self.label_from.setText("From")
|
|
self.gridLayout_groupbox_xaxis_time.addWidget(self.label_from, 0, 0, 1, 1)
|
|
|
|
self.label_tmin = QLabel()
|
|
self.label_tmin.setText("t<span style= vertical-align:sub>min</span> = ")
|
|
self.gridLayout_groupbox_xaxis_time.addWidget(self.label_tmin, 0, 1, 1, 1)
|
|
|
|
self.spinbox_tmin = QDoubleSpinBox()
|
|
self.spinbox_tmin.setRange(0, 9999)
|
|
self.gridLayout_groupbox_xaxis_time.addWidget(self.spinbox_tmin, 0, 2, 1, 1)
|
|
self.spinbox_tmin.valueChanged.connect(self.update_xaxis_transect_with_BS_raw_data)
|
|
self.spinbox_tmin.valueChanged.connect(self.update_xaxis_transect_with_SNR_data)
|
|
|
|
self.label_tmin_unit = QLabel()
|
|
self.label_tmin_unit.setText("sec")
|
|
self.gridLayout_groupbox_xaxis_time.addWidget(self.label_tmin_unit, 0, 3, 1, 1)
|
|
|
|
self.label_to = QLabel()
|
|
self.label_to.setText("to")
|
|
self.gridLayout_groupbox_xaxis_time.addWidget(self.label_to, 0, 4, 1, 1)
|
|
|
|
self.label_tmax = QLabel()
|
|
self.label_tmax.setText("t<span style= vertical-align:sub>max</span> = ")
|
|
self.gridLayout_groupbox_xaxis_time.addWidget(self.label_tmax, 0, 5, 1, 1)
|
|
|
|
self.spinbox_tmax = QDoubleSpinBox()
|
|
self.spinbox_tmax.setRange(0, 9999)
|
|
self.gridLayout_groupbox_xaxis_time.addWidget(self.spinbox_tmax, 0, 6, 1, 1)
|
|
self.spinbox_tmax.valueChanged.connect(self.update_xaxis_transect_with_BS_raw_data)
|
|
self.spinbox_tmax.valueChanged.connect(self.update_xaxis_transect_with_SNR_data)
|
|
|
|
self.label_tmax_unit = QLabel()
|
|
self.label_tmax_unit.setText("sec")
|
|
self.gridLayout_groupbox_xaxis_time.addWidget(self.label_tmax_unit, 0, 7, 1, 1)
|
|
|
|
# --- Group Box Plot x-axis in space ---
|
|
|
|
self.groupbox_xaxis_space = QGroupBox()
|
|
# self.groupbox_xaxis_space.setCheckable(True)
|
|
# self.groupbox_xaxis_space.setChecked(False)
|
|
# self.groupbox_xaxis_space.clicked.connect(self.transect_xaxis_choice)
|
|
self.verticalLayout_display_option.addWidget(self.groupbox_xaxis_space)
|
|
|
|
self.gridLayout_groupbox_xaxis_space = QGridLayout(self.groupbox_xaxis_space)
|
|
self.label_from = QLabel()
|
|
self.label_from.setText("From")
|
|
self.gridLayout_groupbox_xaxis_space.addWidget(self.label_from, 0, 0, 1, 1)
|
|
self.label_xmin = QLabel()
|
|
self.label_xmin.setText("x<span style= vertical-align:sub>min</span> = ")
|
|
self.gridLayout_groupbox_xaxis_space.addWidget(self.label_xmin, 0, 1, 1, 1)
|
|
self.spinbox_xmin = QSpinBox()
|
|
self.spinbox_xmin.setRange(0, 9999)
|
|
self.gridLayout_groupbox_xaxis_space.addWidget(self.spinbox_xmin, 0, 2, 1, 1)
|
|
self.label_xmin_m = QLabel()
|
|
self.label_xmin_m.setText("m")
|
|
self.gridLayout_groupbox_xaxis_space.addWidget(self.label_xmin_m, 0, 3, 1, 1)
|
|
self.label_to = QLabel()
|
|
self.label_to.setText("to")
|
|
self.gridLayout_groupbox_xaxis_space.addWidget(self.label_to, 0, 4, 1, 1)
|
|
self.label_xmax = QLabel()
|
|
self.label_xmax.setText("x<span style= vertical-align:sub>max</span> = ")
|
|
self.gridLayout_groupbox_xaxis_space.addWidget(self.label_xmax, 0, 5, 1, 1)
|
|
self.spinbox_xmax = QSpinBox()
|
|
self.spinbox_xmax.setRange(0, 9999)
|
|
self.gridLayout_groupbox_xaxis_space.addWidget(self.spinbox_xmax, 0, 6, 1, 1)
|
|
self.label_xmax_m = QLabel()
|
|
self.label_xmax_m.setText("m")
|
|
self.gridLayout_groupbox_xaxis_space.addWidget(self.label_xmax_m, 0, 7, 1, 1)
|
|
|
|
# --- Group Box bathymetry computation algorithm to plot bottom of transect---
|
|
|
|
self.groupbox_compute_bathymetry = QGroupBox()
|
|
# # self.groupbox_crosssectionbottom.setTitle("Plot bottom of cross section")
|
|
# self.groupbox_crosssectionbottom.setCheckable(True)
|
|
# self.groupbox_crosssectionbottom.setChecked(False)
|
|
self.verticalLayout_display_option.addWidget(self.groupbox_compute_bathymetry)
|
|
|
|
self.gridlayout_compute_bathymetry = QGridLayout(self.groupbox_compute_bathymetry)
|
|
|
|
self.combobox_freq_choice = QComboBox()
|
|
self.combobox_freq_choice.addItems(['', '0.3 MHz', '0.5 Mhz', '1 MHz', '5 MHz'])
|
|
self.gridlayout_compute_bathymetry.addWidget(self.combobox_freq_choice, 0, 0, 2, 1)
|
|
self.gridlayout_compute_bathymetry.addWidget(self.label_from, 0, 1, 1, 1)
|
|
self.spinbox_depth_min = QSpinBox()
|
|
self.spinbox_depth_min.setRange(0, 9999)
|
|
self.gridlayout_compute_bathymetry.addWidget(self.spinbox_depth_min, 0, 2, 1, 1)
|
|
self.label_depth_min_unit = QLabel()
|
|
self.label_depth_min_unit.setText("m")
|
|
self.gridlayout_compute_bathymetry.addWidget(self.label_depth_min_unit, 0, 3, 1, 1)
|
|
self.gridlayout_compute_bathymetry.addWidget(self.label_to, 0, 4, 1, 1)
|
|
self.spinbox_depth_max = QSpinBox()
|
|
self.spinbox_depth_max.setRange(0, 99999)
|
|
self.gridlayout_compute_bathymetry.addWidget(self.spinbox_depth_max, 0, 5, 1, 1)
|
|
self.label_depth_max_unit = QLabel()
|
|
self.label_depth_max_unit.setText("m")
|
|
self.gridlayout_compute_bathymetry.addWidget(self.label_depth_max_unit, 0, 6, 1, 1)
|
|
self.label_next_cell = QLabel()
|
|
self.label_next_cell.setText("Next cell : +/-")
|
|
self.gridlayout_compute_bathymetry.addWidget(self.label_next_cell, 1, 1, 1, 1)
|
|
self.doublespinbox_next_cell = QDoubleSpinBox()
|
|
self.doublespinbox_next_cell.setRange(0, 99999)
|
|
self.doublespinbox_next_cell.setDecimals(2)
|
|
self.gridlayout_compute_bathymetry.addWidget(self.doublespinbox_next_cell, 1, 2, 1, 1)
|
|
self.label_next_cell_unit = QLabel()
|
|
self.label_next_cell_unit.setText("m")
|
|
self.gridlayout_compute_bathymetry.addWidget(self.label_next_cell_unit, 1, 3, 1, 1)
|
|
self.pushbutton_compute_bathymetry_algorithm = QPushButton()
|
|
self.pushbutton_compute_bathymetry_algorithm.setText("Compute \n&& \nPlot")
|
|
self.gridlayout_compute_bathymetry.addWidget(self.pushbutton_compute_bathymetry_algorithm, 0, 7, 2, 1)
|
|
|
|
# self.pushButton_plot = QPushButton()
|
|
# self.pushButton_plot.setText("Plot")
|
|
# self.verticalLayout_displayoption.addWidget(self.pushButton_plot)
|
|
|
|
# =====================================================
|
|
# BOTTOM HORIZONTAL BOX LAYOUT
|
|
# =====================================================
|
|
|
|
# +++++++++++++++++++++++++++++++++++++************+++
|
|
# | Group Box Backscatter Acoustic Raw Data 2D field |
|
|
# ++++++++++++++++++++++++++************++++++++++++++
|
|
|
|
self.verticalLayout_groupbox_transect_2Dplot_raw_BS_data = QVBoxLayout(self.groupbox_transect_2Dplot_raw_BS_data)
|
|
|
|
self.canvas_BS = None
|
|
|
|
# self.fig_BS, self.axis_BS = plt.subplots(nrows=4, ncols=1, sharex=True, sharey=False, layout="constrained")
|
|
# self.fig, self.ax = plt.subplots(4, 1)
|
|
# self.canvas_BS = FigureCanvas(self.fig_BS)
|
|
# self.canvas_BS = FigureCanvas()
|
|
# self.plotToolbar_rawdata = NavigationToolBar(self.canvas_rawdata, self)
|
|
# self.plot_acoustic_raw_data()
|
|
# self.verticalLayout_plotrawdata.addWidget(self.plotToolbar_rawdata)
|
|
# self.verticalLayout_groupbox_transect_2Dplot_raw_BS_data.addWidget(self.canvas_BS)
|
|
|
|
# ++++++++++++++++++++++++++++++++++++++++++++
|
|
# | Group Box Signal to Noise ratio 2D field |
|
|
# ++++++++++++++++++++++++++++++++++++++++++++
|
|
|
|
self.verticalLayout_groupbox_transect_2Dplot_snr_data = QVBoxLayout(self.groupbox_transect_2Dplot_snr_data)
|
|
|
|
self.canvas_SNR = None
|
|
|
|
# self.figure, self.axis = plt.subplots(nrows=4, ncols=1, sharex=True, sharey=False, layout="constrained")
|
|
# # self.canvas_snrdata = FigureCanvas(self.figure)
|
|
#
|
|
# self.canvas_snrdata = FigureCanvas()
|
|
# # self.plotToolbar_snrdata = NavigationToolBar(self.canvas_snrdata, self)
|
|
# # self.plot_snr_data()
|
|
# # self.verticalLayout_plotsnrdata.addWidget(self.plotToolbar_snrdata)
|
|
# self.verticalLayout_plotsnrdata.addWidget(self.canvas_snrdata)
|
|
#
|
|
# self.horizontalLayoutBottom.addWidget(self.groupbox_transect_2Dplot_snr_data)
|
|
|
|
self.retranslate_acoustic_data_tab()
|
|
|
|
# -------------------- Functions for Acoustic dataTab --------------------
|
|
|
|
def retranslate_acoustic_data_tab(self):
|
|
|
|
self.groupbox_download.setTitle(_translate("CONSTANT_STRING", cs.DOWNLOAD))
|
|
|
|
self.groupbox_acoustic_file.setTitle(_translate("CONSTANT_STRING", cs.ACOUSTIC_FILE))
|
|
self.label_date_groupbox_acoustic_file.setText(_translate("CONSTANT_STRING", cs.DATE) + ":")
|
|
self.label_hour_groupbox_acoustic_file.setText(_translate("CONSTANT_STRING", cs.HOUR) + ":")
|
|
|
|
self.groupbox_noise_file.setTitle(_translate("CONSTANT_STRING", cs.NOISE_FILE))
|
|
self.pushbutton_noise_level_with_tail_of_mean_profile.setText(_translate("CONSTANT_STRING", cs.NOISE_LEVEL))
|
|
self.label_date_groupbox_noise_file.setText(_translate("CONSTANT_STRING", cs.DATE) + ":")
|
|
self.label_hour_groupbox_noise_file.setText(_translate("CONSTANT_STRING", cs.HOUR) + ":")
|
|
|
|
self.groupbox_gps_file.setTitle(_translate("CONSTANT_STRING", cs.GPS_FILE))
|
|
self.label_date_groupbox_gps_file.setText(_translate("CONSTANT_STRING", cs.DATE) + ":")
|
|
self.label_hour_groupbox_gps_file.setText(_translate("CONSTANT_STRING", cs.HOUR) + ":")
|
|
|
|
self.label_time_offset.setText(_translate("CONSTANT_STRING", cs.TIME_OFFSET))
|
|
|
|
self.groupbox_info.setTitle(_translate("CONSTANT_STRING", cs.MEASUREMENTS_INFORMATION))
|
|
|
|
self.label_profiles.setText(_translate("CONSTANT_STRING", cs.NB_PROFILES) + ":")
|
|
self.label_profiles.setToolTip(_translate("CONSTANT_STRING", cs.NB_PROFILES_TOOLTIP))
|
|
|
|
self.label_profiles_per_sec.setText(_translate("CONSTANT_STRING", cs.NB_PROFILES_PER_SEC) + ":")
|
|
self.label_profiles_per_sec.setToolTip(_translate("CONSTANT_STRING", cs.NB_PROFILES_PER_SEC_TOOLTIP))
|
|
|
|
self.label_cells.setText(_translate("CONSTANT_STRING", cs.NB_CELLS) + ":")
|
|
self.label_cells.setToolTip(_translate("CONSTANT_STRING", cs.NB_CELLS_TOOLTIP))
|
|
|
|
self.label_cell_size.setText(_translate("CONSTANT_STRING", cs.CELL_SIZE) + ":")
|
|
self.label_cell_size.setToolTip(_translate("CONSTANT_STRING", cs.CELL_SIZE_TOOLTIP))
|
|
|
|
self.label_pulse_length.setText(_translate("CONSTANT_STRING", cs.PULSE_LENGHT) + ":")
|
|
self.label_pulse_length.setToolTip(_translate("CONSTANT_STRING", cs.PULSE_LENGHT_TOOLTIP))
|
|
|
|
self.label_pings_per_sec.setText(_translate("CONSTANT_STRING", cs.NB_PINGS_PER_SEC))
|
|
self.label_pings_per_sec.setToolTip(_translate("CONSTANT_STRING", cs.NB_PINGS_PER_SEC_TOOLTIP))
|
|
|
|
self.label_pings_per_profile.setText(_translate("CONSTANT_STRING", cs.NB_PINGS_PER_PROFILE) + ":")
|
|
self.label_pings_per_profile.setToolTip(_translate("CONSTANT_STRING", cs.NB_PINGS_PER_PROFILE_TOOLTIP))
|
|
|
|
self.label_freq.setText(_translate("CONSTANT_STRING", cs.FREQUENCY) + ":")
|
|
self.label_freq.setToolTip(_translate("CONSTANT_STRING", cs.FREQUENCY_TOOLTIP))
|
|
|
|
self.label_kt.setText(_translate("CONSTANT_STRING", cs.KT) + ":")
|
|
self.label_kt.setToolTip(_translate("CONSTANT_STRING", cs.KT_TOOLTIP))
|
|
|
|
self.label_rx.setText(_translate("CONSTANT_STRING", cs.GAIN_RX) + ":")
|
|
self.label_rx.setToolTip(_translate("CONSTANT_STRING", cs.GAIN_RX_TOOLTIP))
|
|
|
|
self.label_tx.setText(_translate("CONSTANT_STRING", cs.GAIN_TX) + ":")
|
|
self.label_tx.setToolTip(_translate("CONSTANT_STRING", cs.GAIN_TX_TOOLTIP))
|
|
|
|
self.groupbox_table.setTitle(_translate("CONSTANT_STRING", cs.TABLE_VALUES))
|
|
|
|
self.pushbutton_fill_table.setText(_translate("CONSTANT_STRING", cs.SYNCHRONIZE_AND_FILL_TABLE))
|
|
self.pushbutton_export_table.setText(_translate("CONSTANT_STRING", cs.EXPORT_TABLE))
|
|
|
|
self.groupbox_display_option.setTitle(_translate("CONSTANT_STRING", cs.DISPLAY_OPTIONS))
|
|
|
|
self.pushbutton_plot_transect_with_BS_raw_data.setText(_translate("CONSTANT_STRING", cs.PLOT_TRANSECT))
|
|
self.pushbutton_plot_transect_with_SNR_data.setText(_translate("CONSTANT_STRING", cs.PLOT_SNR))
|
|
|
|
self.groupbox_xaxis_time.setTitle(_translate("CONSTANT_STRING", cs.PLOT_XAXIS_IN_TIME))
|
|
# self.label_tmin.setText(_translate("CONSTANT_STRING", cs.FROM) + " t<span style= vertical-align:sub>min</span> = ")
|
|
# self.label_tmax.setText(_translate("CONSTANT_STRING", cs.TO) + " t<span style= vertical-align:sub>max</span> = ")
|
|
# self.pushButton_plot_acoustic_transect_in_time.setText(_translate("CONSTANT_STRING", cs.PLOT_TRANSECT))
|
|
|
|
self.groupbox_xaxis_space.setTitle(_translate("CONSTANT_STRING", cs.PLOT_XAXIS_IN_SPACE))
|
|
# self.label_zmin.setText(_translate("CONSTANT_STRING", cs.FROM) + " z<span style= vertical-align:sub>min</span> = ")
|
|
# self.label_zmax.setText(_translate("CONSTANT_STRING", cs.TO) + " z<span style= vertical-align:sub>max</span> = ")
|
|
# self.pushButton_plot_acoustic_transect_in_space.setText(_translate("CONSTANT_STRING", cs.PLOT_TRANSECT))
|
|
|
|
self.groupbox_compute_bathymetry.setTitle(_translate("CONSTANT_STRING", cs.PLOT_BOTTOM_CROSS_SECTION))
|
|
# self.label_depthmin.setText(_translate("CONSTANT_STRING", cs.INITIAL_DEPTH_RANGE) + ":")
|
|
# self.label_depthmin.setText(_translate("CONSTANT_STRING", cs.FROM))
|
|
# self.label_to.setText(_translate("CONSTANT_STRING", cs.TO))
|
|
# self.pushButton_bottom_transect.setText(_translate("CONSTANT_STRING", cs.PLOT_BOTTOM))
|
|
|
|
self.groupbox_transect_2Dplot_raw_BS_data.setTitle(_translate("CONSTANT_STRING", cs.RAW_ACOUSTIC_DATA_2D_FIELD))
|
|
|
|
self.groupbox_transect_2Dplot_snr_data.setTitle(_translate("CONSTANT_STRING", cs.SIGNAL_TO_NOISE_RATIO_2D_FIELD))
|
|
|
|
def ABS_system_choice(self):
|
|
if self.combobox_ABS_system_choice.currentText() == "Aquascat 1000R":
|
|
self.groupbox_measurement_information_Aquascat()
|
|
self.lineEdit_acoustic_file.clear()
|
|
self.label_date_groupbox_acoustic_file.clear()
|
|
self.label_date_groupbox_acoustic_file.setText(_translate("CONSTANT_STRING", cs.DATE) + ": ")
|
|
self.label_hour_groupbox_acoustic_file.setText(_translate("CONSTANT_STRING", cs.HOUR) + ": ")
|
|
elif self.combobox_ABS_system_choice.currentText() == "UB-SediFlow":
|
|
self.groupbox_measurement_information_UBSediFlow()
|
|
self.lineEdit_acoustic_file.clear()
|
|
self.label_date_groupbox_acoustic_file.setText(_translate("CONSTANT_STRING", cs.DATE) + ": ")
|
|
self.label_hour_groupbox_acoustic_file.setText(_translate("CONSTANT_STRING", cs.HOUR) + ": ")
|
|
|
|
def groupbox_measurement_information_Aquascat(self):
|
|
# self.gridLayout_goupbox_info.itemAt(0).widget().deleteLater()
|
|
self.label_to_do.hide()
|
|
|
|
self.label_profiles.show()
|
|
self.label_profiles_per_sec.show()
|
|
self.label_cells.show()
|
|
self.label_cell_size.show()
|
|
self.label_pulse_length.show()
|
|
self.label_pings_per_sec.show()
|
|
self.label_pings_per_profile.show()
|
|
self.label_freq.show()
|
|
self.label_kt.show()
|
|
self.label_rx.show()
|
|
self.label_tx.show()
|
|
|
|
self.gridLayout_goupbox_info.addWidget(self.label_profiles, 0, 0, 1, 1)
|
|
self.gridLayout_goupbox_info.addWidget(self.label_profiles_per_sec, 0, 1, 1, 1)
|
|
self.gridLayout_goupbox_info.addWidget(self.label_cells, 1, 0, 1, 1)
|
|
self.gridLayout_goupbox_info.addWidget(self.label_cell_size, 1, 1, 1, 1)
|
|
self.gridLayout_goupbox_info.addWidget(self.label_pulse_length, 2, 0, 1, 1)
|
|
self.gridLayout_goupbox_info.addWidget(self.label_pings_per_sec, 3, 0, 1, 1)
|
|
self.gridLayout_goupbox_info.addWidget(self.label_pings_per_profile, 3, 1, 1, 1)
|
|
self.gridLayout_goupbox_info.addWidget(self.label_freq, 4, 0, 1, 2)
|
|
self.gridLayout_goupbox_info.addWidget(self.label_kt, 5, 0, 1, 2)
|
|
self.gridLayout_goupbox_info.addWidget(self.label_rx, 6, 0, 1, 2)
|
|
self.gridLayout_goupbox_info.addWidget(self.label_tx, 7, 0, 1, 2)
|
|
|
|
def groupbox_measurement_information_UBSediFlow(self):
|
|
# self.gridLayout_goupbox_info.itemAt(0).widget().deleteLater()
|
|
|
|
self.label_profiles.hide()
|
|
self.label_profiles_per_sec.hide()
|
|
self.label_cells.hide()
|
|
self.label_cell_size.hide()
|
|
self.label_pulse_length.hide()
|
|
self.label_pings_per_sec.hide()
|
|
self.label_pings_per_profile.hide()
|
|
self.label_freq.hide()
|
|
self.label_kt.hide()
|
|
self.label_rx.hide()
|
|
self.label_tx.hide()
|
|
|
|
self.label_to_do.show()
|
|
|
|
self.gridLayout_goupbox_info.addWidget(self.label_to_do, 0, 0, 1, 1)
|
|
|
|
def clicked_pushbutton_noise_level(self):
|
|
self.WindowNoiseLevelTailAveragedProfile().show()
|
|
|
|
def open_dialog_box(self):
|
|
if self.combobox_ABS_system_choice.currentIndex() == 0:
|
|
msgBox = QMessageBox()
|
|
msgBox.setWindowTitle("Download Error")
|
|
msgBox.setIcon(QMessageBox.Warning)
|
|
msgBox.setText("Choose ABS system before download acoustic files")
|
|
msgBox.setStandardButtons(QMessageBox.Ok)
|
|
msgBox.exec()
|
|
elif self.combobox_ABS_system_choice.currentIndex() == 1:
|
|
filename = QFileDialog.getOpenFileName(self, "Open file",
|
|
"/home/bmoudjed/Documents/3 SSC acoustic meas project/Graphical interface project/Data",
|
|
"Aquascat file (*.aqa)")
|
|
dir_name = path.dirname(filename[0])
|
|
name = path.basename(filename[0])
|
|
elif self.combobox_ABS_system_choice.currentIndex() == 2:
|
|
filename = QFileDialog.getOpenFileName(self, "Open file", "", "UBSediFlow file (*.udt)")
|
|
dir_name = path.dirname(filename[0])
|
|
name = path.basename(filename[0])
|
|
if self.combobox_ABS_system_choice.currentIndex() != 0:
|
|
if self.sender().objectName() == "pushbutton_acoustic_file":
|
|
self.lineEdit_acoustic_file.setText(name)
|
|
self.lineEdit_acoustic_file.setToolTip(dir_name)
|
|
acoustic_data = self.load_BS_acoustic_raw_data()
|
|
self.label_date_groupbox_acoustic_file.setText(
|
|
_translate("CONSTANT_STRING", cs.DATE) + ": " + str(acoustic_data._date))
|
|
self.label_hour_groupbox_acoustic_file.setText(
|
|
_translate("CONSTANT_STRING", cs.HOUR) + ": " + str(acoustic_data._hour))
|
|
self.fill_measurements_information_groupbox()
|
|
if self.sender().objectName() == "pushbutton_noise_file":
|
|
self.lineEdit_noise_file.setText(name)
|
|
self.lineEdit_noise_file.setToolTip(dir_name)
|
|
noise_data = self.load_noise_data()
|
|
self.label_date_groupbox_noise_file.setText(
|
|
_translate("CONSTANT_STRING", cs.DATE) + ": " + str(noise_data._date))
|
|
self.label_hour_groupbox_noise_file.setText(
|
|
_translate("CONSTANT_STRING", cs.HOUR) + ": " + str(noise_data._hour))
|
|
# return filename[0]
|
|
|
|
def load_BS_acoustic_raw_data(self):
|
|
acoustic_data = \
|
|
AcousticDataLoader(self.lineEdit_acoustic_file.toolTip() + "/" + self.lineEdit_acoustic_file.text())
|
|
return acoustic_data
|
|
|
|
def load_noise_data(self):
|
|
noise_data = AcousticDataLoader(self.lineEdit_noise_file.toolTip() + "/" + self.lineEdit_noise_file.text())
|
|
return noise_data
|
|
|
|
def compute_SNR(self):
|
|
acoustic_data = self.load_BS_acoustic_raw_data()
|
|
noise_data = self.load_noise_data()
|
|
noise = np.zeros(acoustic_data._BS_raw_data.shape)
|
|
for f in range(noise_data._freq.shape[0]):
|
|
# print(np.mean(self.V_noise[:, f, :], axis=(0, 1)))
|
|
# BS_noise_section[0:BS_noise_section.shape[0], f, 0:BS_noise_section.shape[2]] = \
|
|
noise[:, f, :] = np.mean(noise_data._BS_raw_data[:, f, :], axis=(0, 1))
|
|
noise_data._time_snr = acoustic_data._time
|
|
noise_data._snr = np.divide((acoustic_data._BS_raw_data - noise)**2, noise**2)
|
|
noise_data._snr_reshape = np.reshape(noise_data._snr,
|
|
(acoustic_data._r.shape[0] * acoustic_data._time.shape[0],
|
|
noise_data._freq.shape[0]),
|
|
order="F")
|
|
return noise_data
|
|
|
|
def fill_measurements_information_groupbox(self):
|
|
acoustic_data = self.load_BS_acoustic_raw_data()
|
|
|
|
self.label_profiles.setText(
|
|
_translate("CONSTANT_STRING", cs.NB_PROFILES) + ": " + str(acoustic_data._nb_profiles))
|
|
self.label_profiles_per_sec.setText(
|
|
_translate("CONSTANT_STRING", cs.NB_PROFILES_PER_SEC) + ": " +
|
|
str(acoustic_data._nb_profiles_per_sec) + " Hz")
|
|
self.label_freq.setText(
|
|
_translate("CONSTANT_STRING", cs.FREQUENCY) + ": " + ', '.join(acoustic_data._freq_text))
|
|
self.label_cells.setText(
|
|
_translate("CONSTANT_STRING", cs.NB_CELLS) + ": " + str(acoustic_data._nb_cells))
|
|
self.label_cell_size.setText(
|
|
_translate("CONSTANT_STRING", cs.CELL_SIZE) + ": " + str(100*round(acoustic_data._cell_size, 3)) + " cm")
|
|
self.label_pulse_length.setText(
|
|
_translate("CONSTANT_STRING", cs.PULSE_LENGHT) + ": " + str(round(acoustic_data._pulse_length,6)) + "sec")
|
|
self.label_pings_per_sec.setText(
|
|
_translate("CONSTANT_STRING", cs.NB_PINGS_PER_SEC) + ": " + str(acoustic_data._nb_pings_per_sec) + " Hz")
|
|
self.label_pings_per_profile.setText(
|
|
_translate("CONSTANT_STRING", cs.NB_PINGS_PER_PROFILE) + ": " +
|
|
str(acoustic_data._nb_pings_averaged_per_profile))
|
|
self.label_kt.setText(
|
|
_translate("CONSTANT_STRING", cs.KT) + ": " + ', '.join(map(str, acoustic_data._kt)))
|
|
self.label_rx.setText(
|
|
_translate("CONSTANT_STRING", cs.GAIN_RX) + ": " + ', '.join(map(str, acoustic_data._gain_rx)))
|
|
self.label_tx.setText(
|
|
_translate("CONSTANT_STRING", cs.GAIN_TX) + ": " + ', '.join(map(str, acoustic_data._gain_tx)))
|
|
|
|
def fill_table(self):
|
|
if ((self.lineEdit_acoustic_file.text()) and (self.lineEdit_noise_file.text())):
|
|
# --- Load data ---
|
|
acoustic_data = self.load_BS_acoustic_raw_data()
|
|
noise_data = self.compute_SNR()
|
|
# --- Fill table with data ---
|
|
data = pd.DataFrame(
|
|
np.concatenate((acoustic_data.reshape_t(), acoustic_data.reshape_BS_raw_cross_section(),
|
|
noise_data._snr_reshape), axis=1),
|
|
columns=list(map(str, ["Time"] + ["BS - " + f for f in acoustic_data._freq_text] +
|
|
["SNR - " + f for f in acoustic_data._freq_text])))
|
|
self.tableModel = TableModel(data)
|
|
self.tableView.setModel(self.tableModel)
|
|
elif self.lineEdit_acoustic_file.text():
|
|
# --- Load data ---
|
|
acoustic_data = self.load_BS_acoustic_raw_data()
|
|
# --- Fill table with data ---
|
|
data = pd.DataFrame(
|
|
np.concatenate((acoustic_data.reshape_t(), acoustic_data.reshape_BS_raw_cross_section()), axis=1),
|
|
columns=list(map(str, ["Time"] + ["BS - " + f for f in acoustic_data._freq_text])))
|
|
self.tableModel = TableModel(data)
|
|
self.tableView.setModel(self.tableModel)
|
|
else:
|
|
msgBox = QMessageBox()
|
|
msgBox.setWindowTitle("Fill table Error")
|
|
msgBox.setIcon(QMessageBox.Warning)
|
|
msgBox.setText("Download files before fill table")
|
|
msgBox.setStandardButtons(QMessageBox.Ok)
|
|
msgBox.exec()
|
|
|
|
def export_table(self):
|
|
if self.tableWidget.columnCount() == 10:
|
|
msgBox = QMessageBox()
|
|
msgBox.setWindowTitle("Export table Error")
|
|
msgBox.setIcon(QMessageBox.Warning)
|
|
msgBox.setText("Fill table before export table")
|
|
msgBox.setStandardButtons(QMessageBox.Ok)
|
|
msgBox.exec()
|
|
else:
|
|
print("export table")
|
|
|
|
def transect_xaxis_choice(self):
|
|
if self.groupbox_xaxis_time.isChecked() == True:
|
|
# self.groupbox_xaxis_time.setDisabled(True)
|
|
self.groupbox_xaxis_space.setChecked(False)
|
|
# self.groupbox_xaxis_space.setDisabled(False)
|
|
elif self.groupbox_xaxis_space.isChecked() == True:
|
|
self.groupbox_xaxis_time.setChecked(False)
|
|
# self.groupbox_xaxis_time.setDisabled(False)
|
|
# self.groupbox_xaxis_space.setDisabled(True)
|
|
|
|
|
|
# def fill_lineEdit(self, dir_name, name):
|
|
# if self.pushbutton_acousticfile.isChecked():
|
|
# self.lineEdit_acousticfile.setText(name)
|
|
# self.lineEdit_acousticfile.setToolTip(dir_name)
|
|
# self.fill_label_acoustic_file()
|
|
# self.fill_measurements_information_groupbox()
|
|
# self.pushbutton_acousticfile.setChecked(False)
|
|
# elif self.pushButton_noisefile.isChecked():
|
|
# self.lineEdit_noisefile.setText(name)
|
|
# self.lineEdit_noisefile.setToolTip(dir_name)
|
|
# self.fill_label_noise_file()
|
|
# self.pushButton_noisefile.setChecked(False)
|
|
# elif self.pushButton_gpsfile.isChecked():
|
|
# self.lineEdit_gpsfile.setText(name)
|
|
# self.lineEdit_gpsfile.setToolTip(dir_name)
|
|
# self.fill_label_gps_file()
|
|
# self.pushButton_gpsfile.setChecked(False)
|
|
#
|
|
# def fill_label_acoustic_file(self):
|
|
# self.label_date_acousticfile.setText(
|
|
# _translate("CONSTANT_STRING", cs.DATE) + ": " + str(self._model.data.date.date()))
|
|
# self.label_hour_acousticfile.setText(
|
|
# _translate("CONSTANT_STRING", cs.HOUR) + ": " + str(self._model.data.date.time()))
|
|
#
|
|
# def fill_label_noise_file(self):
|
|
# self.label_date_noise_file.setText(
|
|
# _translate("CONSTANT_STRING", cs.DATE) + ": " + str(self._model.data.date.date()))
|
|
# self.label_hour_noise_file.setText(
|
|
# _translate("CONSTANT_STRING", cs.HOUR) + ": " + str(self._model.data.date.time()))
|
|
#
|
|
# def fill_label_gps_file(self):
|
|
# pass
|
|
# # self.label_date_gps_file.setText(
|
|
# # _translate("CONSTANT_STRING", cs.DATE) + ": " + str(self._model.gps_load_date_hour.date()))
|
|
# # self.label_hour_gps_file.setText(
|
|
# # _translate("CONSTANT_STRING", cs.HOUR) + ": " + str(self._model.gps_load_date_hour.time()))
|
|
|
|
|
|
|
|
# def fill_table(self):
|
|
# print("it's clicked")
|
|
# print(AcousticData.concatenate_data(self))
|
|
# # if event.type() == QEvent.MouseButtonPress:
|
|
# # print("Fill table")
|
|
# # print("event = ", event)
|
|
# # print("QEvent.MouseButtonPress ", QEvent.MouseButtonPress)
|
|
# # super(AcousticDataTab, self).mousePressEvent(event)
|
|
# # print("1 : connect widget to controller - fill table")
|
|
# # self._controller.update_table_data()
|
|
# # data = self._model.acoustic_data_table
|
|
# # tableModel = TableModel(data)
|
|
# # self.tableView.setModel(tableModel)
|
|
# # print("open dialog box ", self.open_dialog_box())
|
|
#
|
|
# def on_BS_data_updated(self, value):
|
|
# pass
|
|
|
|
def plot_transect_with_BS_raw_data(self):
|
|
if self.tableModel.rowCount(1) > 11:
|
|
acoustic_data = self.load_BS_acoustic_raw_data()
|
|
# print(np.max(acoustic_data._time))
|
|
|
|
# print("tmin value ", self.spinbox_tmin.value())
|
|
# print("tmin index ", np.where(np.round(acoustic_data._time, 2) == self.spinbox_tmin.value())[0][0])
|
|
|
|
# print("tmax value ", self.spinbox_tmax.value())
|
|
# print("tmax index ", np.where(np.round(acoustic_data._time, 2) == self.spinbox_tmax.value())[0][0])
|
|
self.fig_BS, self.axis_BS = plt.subplots(nrows=acoustic_data._freq.shape[0], ncols=1, sharex=True, sharey=False, layout="constrained")
|
|
self.canvas_BS = FigureCanvas(self.fig_BS)
|
|
self.verticalLayout_groupbox_transect_2Dplot_raw_BS_data.addWidget(self.canvas_BS)
|
|
|
|
# self.scroll_BS = QScrollArea()
|
|
# self.scroll_BS.setWidget(self.canvas_BS)
|
|
|
|
self.spinbox_tmin.setValue(np.min(acoustic_data._time))
|
|
self.spinbox_tmax.setValue(np.round(np.max(acoustic_data._time), 2))
|
|
|
|
for f in range(acoustic_data._freq.shape[0]):
|
|
# self.ax = self.fig.add_subplot((4, 1, f+1), sharex=True, sharey=False)
|
|
# val_min = np.min(self.model.V[:, f, :2300])
|
|
val_min = np.min(acoustic_data._BS_raw_data[:, f, :])
|
|
# val_max = np.max(self.model.V[:, f, :2300])
|
|
val_max = np.max(acoustic_data._BS_raw_data[:, f, :])
|
|
if val_min == 0:
|
|
val_min = 1e-5
|
|
# if val_min == 0:
|
|
# val_min = 1e-5
|
|
# self.ax[f].imshow(np.asarray(np.array(self.model.BS_raw_cross_section.V[:, f, :], dtype=float)), aspect='auto',
|
|
# extent=[0, 1912, self.model.depth[-1][0], self.model.depth[0][0]],
|
|
# cmap='viridis', norm=LogNorm(vmin=val_min, vmax=val_max))
|
|
# self.ax[f].plot(self.model.r_bottom_cross_section, color='red', linewidth=2)
|
|
pcm = self.axis_BS[f].pcolormesh(
|
|
acoustic_data._time[np.where(np.round(acoustic_data._time, 2) == self.spinbox_tmin.value())[0][0]:
|
|
np.where(np.round(acoustic_data._time, 2) == self.spinbox_tmax.value())[0][0]],
|
|
acoustic_data._r ,
|
|
np.flipud(acoustic_data._BS_raw_data[:, f,
|
|
np.where(np.round(acoustic_data._time, 2) == self.spinbox_tmin.value())[0][0]:
|
|
np.where(np.round(acoustic_data._time, 2) == self.spinbox_tmax.value())[0][0]]),
|
|
cmap='viridis', norm=LogNorm(vmin=val_min, vmax=val_max))#, shading='gouraud')
|
|
# self.axis_BS[f].plot(self._model.dist_BS_section,
|
|
# np.max(self._model.r_bottom_cross_section) - self._model.r_bottom_cross_section + np.min(self._model.r_bottom_cross_section),
|
|
# color='red', linewidth=2)
|
|
# x, y = np.meshgrid(self.model.dist_BS_section, self.model.BS_raw_cross_section.r)
|
|
# z = np.cos(x) + np.sin(y)
|
|
# self.ax[f].contour(x, y, z, levels = 0, colors='k')
|
|
# self.ax[f].plot([25, 200], [5, 5], '-k')
|
|
self.axis_BS[f].text(1, .70, acoustic_data._freq_text[f],
|
|
fontsize=14, fontweight='bold', fontname="Ubuntu", c="black", alpha=0.5,
|
|
horizontalalignment='right', verticalalignment='bottom', transform=self.axis_BS[f].transAxes)
|
|
|
|
self.fig_BS.supxlabel('Distance from left bank (m)', fontsize=10)
|
|
self.fig_BS.supylabel('Depth (m)', fontsize=10)
|
|
# plt.subplots_adjust(bottom=0.125, top=0.98, right=1.03, left=0.08, hspace=0.1)
|
|
# self.fig.tight_layout()
|
|
cbar = self.fig_BS.colorbar(pcm, ax=self.axis_BS[:], shrink=1, location='right')
|
|
cbar.set_label(label='Backscatter acoustic signal (V)', rotation=270, labelpad=10)
|
|
self.fig_BS.canvas.draw_idle()
|
|
else:
|
|
msgBox = QMessageBox()
|
|
msgBox.setWindowTitle("Plot transect Error")
|
|
msgBox.setIcon(QMessageBox.Warning)
|
|
msgBox.setText("Fill table before plot transect 2D field")
|
|
msgBox.setStandardButtons(QMessageBox.Ok)
|
|
msgBox.exec()
|
|
|
|
def plot_transect_with_SNR_data(self):
|
|
if self.tableModel.rowCount(1) == 10:
|
|
msgBox = QMessageBox()
|
|
msgBox.setWindowTitle("Plot transect Error")
|
|
msgBox.setIcon(QMessageBox.Warning)
|
|
msgBox.setText("Fill table before plot SNR 2D field")
|
|
msgBox.setStandardButtons(QMessageBox.Ok)
|
|
msgBox.exec()
|
|
elif self.canvas_BS == None:
|
|
msgBox = QMessageBox()
|
|
msgBox.setWindowTitle("Plot transect Error")
|
|
msgBox.setIcon(QMessageBox.Warning)
|
|
msgBox.setText("Plot backscatter acoustic raw data 2D field before plot SNR 2D field")
|
|
msgBox.setStandardButtons(QMessageBox.Ok)
|
|
msgBox.exec()
|
|
elif self.tableModel.rowCount(1) > 11:
|
|
noise_data = self.compute_SNR()
|
|
|
|
self.fig_SNR, self.axis_SNR = plt.subplots(nrows=noise_data._freq.shape[0] , ncols=1,
|
|
sharex=True, sharey=False, layout="constrained")
|
|
self.canvas_SNR = FigureCanvas(self.fig_SNR)
|
|
self.verticalLayout_groupbox_transect_2Dplot_snr_data.addWidget(self.canvas_SNR)
|
|
|
|
# self.spinbox_tmin.setValue(np.min(noise_data._time_snr))
|
|
# self.spinbox_tmax.setValue(np.round(np.max(noise_data._time_snr), 2))
|
|
|
|
x, y = np.meshgrid(
|
|
noise_data._time_snr[np.where(np.round(noise_data._time_snr, 2) == self.spinbox_tmin.value())[0][0]:
|
|
np.where(np.round(noise_data._time_snr, 2) == self.spinbox_tmax.value())[0][0]],
|
|
noise_data._r)
|
|
|
|
for f in range(noise_data._freq.shape[0]):
|
|
|
|
val_min = np.min(noise_data._snr[:, f, :])
|
|
val_max = np.max(noise_data._snr[:, f, :])
|
|
if val_min == 0:
|
|
val_min = 1e-5
|
|
if val_max > 1000:
|
|
levels = np.array([00.1, 1, 2, 10, 100, 1000, 1e6])
|
|
else:
|
|
levels = np.array([00.1, 1, 2, 10, 100, val_max])
|
|
bounds = [00.1, 1, 2, 10, 100, 1000, val_max, val_max * 1.2]
|
|
norm = BoundaryNorm(boundaries=bounds, ncolors=300)
|
|
|
|
cf = self.axis_SNR[f].contourf(x, y,
|
|
np.flipud(noise_data._snr[:, f,
|
|
np.where(np.round(noise_data._time_snr, 2) == self.spinbox_tmin.value())[0][0]:
|
|
np.where(np.round(noise_data._time_snr, 2) == self.spinbox_tmax.value())[0][0]]),
|
|
levels, cmap='gist_rainbow', norm=norm)#, shading='gouraud')
|
|
|
|
self.axis_SNR[f].text(1, .70, noise_data._freq_text[f],
|
|
fontsize=14, fontweight='bold', fontname="Ubuntu", c="black", alpha=0.5,
|
|
horizontalalignment='right', verticalalignment='bottom', transform=self.axis_SNR[f].transAxes)
|
|
|
|
self.fig_SNR.supxlabel('Distance from left bank (m)', fontsize=10)
|
|
self.fig_SNR.supylabel('Depth (m)', fontsize=10)
|
|
# plt.subplots_adjust(bottom=0.125, top=0.98, right=1.03, left=0.08, hspace=0.1)
|
|
# self.fig.tight_layout()
|
|
cbar = self.fig_SNR.colorbar(cf, ax=self.axis_SNR[:], shrink=1, location='right')
|
|
cbar.set_label(label='Signal to Noise Ratio', rotation=270, labelpad=10)
|
|
cbar.set_ticklabels(['0', '1', '2', '10', '100', r'10$^3$', r'10$^6$'])
|
|
self.fig_SNR.canvas.draw_idle()
|
|
|
|
def update_xaxis_transect_with_BS_raw_data(self):
|
|
if self.canvas_BS == None:
|
|
msgBox = QMessageBox()
|
|
msgBox.setWindowTitle("Plot transect Error")
|
|
msgBox.setIcon(QMessageBox.Warning)
|
|
msgBox.setText("Plot transect before change x-axis value")
|
|
msgBox.setStandardButtons(QMessageBox.Ok)
|
|
msgBox.exec()
|
|
else:
|
|
# print(self.axis_BS.cla())
|
|
# self.fig_BS.clf()
|
|
|
|
acoustic_data = self.load_BS_acoustic_raw_data()
|
|
# self.fig_BS, self.axis_BS = plt.subplots(nrows=acoustic_data._freq.shape[0], ncols=1, sharex=True,
|
|
# sharey=False, layout="constrained")
|
|
# self.canvas_BS = FigureCanvas(self.fig_BS)
|
|
# self.verticalLayout_groupbox_transect_2Dplot_raw_BS_data.addWidget(self.canvas_BS)
|
|
|
|
for f in range(acoustic_data._freq.shape[0]):
|
|
self.axis_BS[f].cla()
|
|
val_min = np.min(acoustic_data._BS_raw_data[:, f, :])
|
|
val_max = np.max(acoustic_data._BS_raw_data[:, f, :])
|
|
if val_min == 0:
|
|
val_min = 1e-5
|
|
pcm = self.axis_BS[f].pcolormesh(
|
|
acoustic_data._time[np.where(np.round(acoustic_data._time, 2) == self.spinbox_tmin.value())[0][0]:
|
|
np.where(np.round(acoustic_data._time, 2) == self.spinbox_tmax.value())[0][0]],
|
|
acoustic_data._r ,
|
|
np.flipud(acoustic_data._BS_raw_data[:, f,
|
|
np.where(np.round(acoustic_data._time, 2) == self.spinbox_tmin.value())[0][0]:
|
|
np.where(np.round(acoustic_data._time, 2) == self.spinbox_tmax.value())[0][0]]),
|
|
cmap='viridis', norm=LogNorm(vmin=val_min, vmax=val_max))#, shading='gouraud')
|
|
|
|
self.axis_BS[f].text(1, .70, acoustic_data._freq_text[f],
|
|
fontsize=14, fontweight='bold', fontname="Ubuntu", c="black", alpha=0.5,
|
|
horizontalalignment='right', verticalalignment='bottom', transform=self.axis_BS[f].transAxes)
|
|
|
|
self.fig_BS.supxlabel('Distance from left bank (m)', fontsize=10)
|
|
self.fig_BS.supylabel('Depth (m)', fontsize=10)
|
|
# cbar = self.fig_BS.colorbar(pcm, ax=self.axis_BS[:], shrink=1, location='right')
|
|
# cbar.set_label(label='Backscatter acoustic signal (V)', rotation=270, labelpad=10)
|
|
self.fig_BS.canvas.draw_idle()
|
|
|
|
def update_xaxis_transect_with_SNR_data(self):
|
|
noise_data = self.compute_SNR()
|
|
if ((self.canvas_BS != None) and (self.canvas_SNR != None)):
|
|
|
|
x, y = np.meshgrid(
|
|
noise_data._time_snr[np.where(np.round(noise_data._time_snr, 2) == self.spinbox_tmin.value())[0][0]:
|
|
np.where(np.round(noise_data._time_snr, 2) == self.spinbox_tmax.value())[0][0]],
|
|
noise_data._r)
|
|
|
|
for f in range(noise_data._freq.shape[0]):
|
|
self.axis_SNR[f].cla()
|
|
|
|
val_min = np.min(noise_data._snr[:, f, :])
|
|
val_max = np.max(noise_data._snr[:, f, :])
|
|
if val_min == 0:
|
|
val_min = 1e-5
|
|
if val_max > 1000:
|
|
levels = np.array([00.1, 1, 2, 10, 100, 1000, 1e6])
|
|
else:
|
|
levels = np.array([00.1, 1, 2, 10, 100, val_max])
|
|
bounds = [00.1, 1, 2, 10, 100, 1000, val_max, val_max * 1.2]
|
|
norm = BoundaryNorm(boundaries=bounds, ncolors=300)
|
|
|
|
cf = self.axis_SNR[f].contourf(x, y,
|
|
np.flipud(noise_data._snr[:, f,
|
|
np.where(np.round(noise_data._time_snr,
|
|
2) == self.spinbox_tmin.value())[0][0]:
|
|
np.where(np.round(noise_data._time_snr,
|
|
2) == self.spinbox_tmax.value())[0][0]]),
|
|
levels, cmap='gist_rainbow', norm=norm) # , shading='gouraud')
|
|
|
|
self.axis_SNR[f].text(1, .70, noise_data._freq_text[f],
|
|
fontsize=14, fontweight='bold', fontname="Ubuntu", c="black", alpha=0.5,
|
|
horizontalalignment='right', verticalalignment='bottom',
|
|
transform=self.axis_SNR[f].transAxes)
|
|
|
|
self.fig_SNR.supxlabel('Distance from left bank (m)', fontsize=10)
|
|
self.fig_SNR.supylabel('Depth (m)', fontsize=10)
|
|
# plt.subplots_adjust(bottom=0.125, top=0.98, right=1.03, left=0.08, hspace=0.1)
|
|
# self.fig.tight_layout()
|
|
# cbar = self.fig_SNR.colorbar(cf, ax=self.axis_SNR[:], shrink=1, location='right')
|
|
# cbar.set_label(label='Signal to Noise Ratio', rotation=270, labelpad=10)
|
|
# cbar.set_ticklabels(['0', '1', '2', '10', '100', r'10$^3$', r'10$^6$'])
|
|
self.fig_SNR.canvas.draw_idle()
|
|
|
|
|
|
# self.ax[f].plot(self.model.r_bottom_cross_section, color='red', linewidth=2)
|
|
#
|
|
# def plot_snr_data(self):
|
|
#
|
|
# # self.canvas_snrdata = FigureCanvas(self.figure)
|
|
#
|
|
# frequency = self._model.Freq
|
|
# for f in range(len(frequency)):
|
|
# # self.axis = self.figure.add_subplot(4, 1, f+1)
|
|
# val_min = np.nanmin(self._model.snr[:, f, :])
|
|
# val_max = np.nanmax(self._model.snr[:, f, :])
|
|
# # val_min = np.nanmin(self.model.V_noise[:, f, :])
|
|
# # val_max = np.nanmax(self.model.V_noise[:, f, :])
|
|
# # if val_min == 0:
|
|
# # val_min = 0.5
|
|
# if val_min == 0:
|
|
# val_min = 0.5
|
|
# # self.axis[f].imshow(np.asarray(np.array(self.model.V_noise[:, f, :], dtype=float)), aspect='auto',
|
|
# # extent=[0, 2300, self.model.depth[-1][0], self.model.depth[0][0]],
|
|
# # cmap='hsv', norm=LogNorm(vmin=val_min, vmax=val_max))
|
|
#
|
|
# # self.axis[f].pcolormesh(self.model.dist_BS_section, np.flipud(self.model.BS_raw_cross_section.r),
|
|
# # self.model.snr[:, f, :],
|
|
# # cmap='hsv', norm=LogNorm(vmin=val_min, vmax=val_max), shading='gouraud')
|
|
#
|
|
# x, y = np.meshgrid(self._model.dist_BS_section, self._model.BS_raw_cross_section.r)
|
|
# if val_max > 1000:
|
|
# levels = np.array([00.1, 1, 2, 10, 100, 1000, val_max])
|
|
# else:
|
|
# levels = np.array([00.1, 1, 2, 10, 100, val_max])
|
|
# bounds = [00.1, 1, 2, 10, 100, 1000, val_max, val_max * 1.2]
|
|
# norm = BoundaryNorm(boundaries=bounds, ncolors=300)
|
|
# pcm_snr = self.axis[f].contourf(x, y, np.flipud(self._model.snr[:, f, :]), levels,
|
|
# cmap='gist_rainbow', linewidths=None, norm=norm,
|
|
# extent=[self._model.dist_BS_section[0], self._model.dist_BS_section[-1],
|
|
# self._model.BS_raw_cross_section.r[-1], self._model.BS_raw_cross_section.r[0]])
|
|
#
|
|
# self.axis[f].plot(self._model.dist_BS_section,
|
|
# np.max(self._model.r_bottom_cross_section) - self._model.r_bottom_cross_section + np.min(
|
|
# self._model.r_bottom_cross_section),
|
|
# color='k', linewidth=2)
|
|
# self.axis[f].text(1, .70, self._model.freq_text[f],
|
|
# fontsize=14, fontweight='bold', fontname="Ubuntu", c="black", alpha=0.5,
|
|
# horizontalalignment='right', verticalalignment='bottom', transform=self.axis[f].transAxes)
|
|
#
|
|
# self.figure.supxlabel('Distance from left bank (m)', fontsize=10)
|
|
# self.figure.supylabel('Depth (m)', fontsize=10)
|
|
# # self.figure.tight_layout()
|
|
# cbar_snr = self.figure.colorbar(pcm_snr, ax=self.axis[:], shrink=1, location='right')
|
|
# cbar_snr.set_label(label='SNR', rotation=270)
|
|
# self.figure.canvas.draw_idle()
|
|
#
|
|
#
|